DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1236 and ghrA

DIOPT Version :10

Sequence 1:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_415551.2 Gene:ghrA / 946431 ECOCYCID:G6539 Length:312 Species:Escherichia coli


Alignment Length:325 Identity:80/325 - (24%)
Similarity:131/325 - (40%) Gaps:52/325 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LELLRKSCQVSTWHETNPVPRSELIRVVAGK----DALYCALTDKVDKEVLDAAGPQLKCVATIS 101
            :|.|||:           :|::   ||.|.|    |:...||......|:|  ||..||.|..:.
E. coli    16 IEALRKA-----------IPQA---RVRAWKSGDNDSADYALVWHPPVEML--AGRDLKAVFALG 64

  Fly   102 VGYDHIDVEECRKRGIRVGFTPDVLT--------------DATAELTLALLLATNRRLFEANKQV 152
            .|.|.| :.:.:..       |::|.              :...|..::.:|...||..:...|.
E. coli    65 AGVDSI-LSKLQAH-------PEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQ 121

  Fly   153 YNGGWKSWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARIVPFK-PTEITYTTRSLRPKEAAAVNA 216
            .:..|:. .|.:    ..:...:|:||.|.:|.::|..:..:: |......||...|  .....|
E. coli   122 NSSHWQP-LPEY----HREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWP--GVQSFA 179

  Fly   217 RHVDFDEMLRESDLIVVCCALTPETKEIFNATAFQKMKPNCILINTARGGVVDQKALYEALKTKR 281
            ...:....|.:..:::.....||||..|.|....:|:.....|:|.|||..|.:..|..||.:.:
E. coli   180 GREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGK 244

  Fly   282 ILAAGLDVTTPEPLPIDDPLLKLDNVVILPHIGSADIETRKEMSRITARNILAALAGDKMVAEVE 346
            :..|.|||...||||.:.||.:...|.|.||:  |.|....|.....:|.|.....|:::..:|:
E. coli   245 VKGAMLDVFNREPLPPESPLWQHPRVTITPHV--AAITRPAEAVEYISRTIAQLEKGERVCGQVD 307

  Fly   347  346
            E. coli   308  307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1236NP_649579.2 GDH 27..338 CDD:240626 78/315 (25%)
ghrANP_415551.2 ghrA 1..312 CDD:185366 80/325 (25%)

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