DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1236 and SER3

DIOPT Version :9

Sequence 1:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_011004.3 Gene:SER3 / 856814 SGDID:S000000883 Length:469 Species:Saccharomyces cerevisiae


Alignment Length:358 Identity:89/358 - (24%)
Similarity:165/358 - (46%) Gaps:36/358 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPPRLPFGQVRNLLIQGHIIRRMSSQHKVYVTRPDVDDSGLELLRKSCQVSTWHETNPVPRSELI 65
            :|.||      |.:....|::..|:.....:...:|:.:.:.:..:......::::: :|..|||
Yeast    38 VPQRL------NAVKHPKILKPFSTGDMKILLLENVNQTAITIFEEQGYQVEFYKSS-LPEEELI 95

  Fly    66 RVVAGKDALYCALTDKVDKEVLDAAGPQLKCVATISVGYDHIDVEECRKRGIRVGFTPDVLTDAT 130
            ..:....|:......::...||..| ..|.|:....:|.:.:|::....|||.|..:|...:.:.
Yeast    96 EKIKDVHAIGIRSKTRLTSNVLQHA-KNLVCIGCFCIGTNQVDLDYATSRGIAVFNSPFSNSRSV 159

  Fly   131 AELTLALLLATNRRLFEANKQVYNGGW-KSWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARIVPF 194
            |||.:|.:::..|:|.:.:.:::.|.| |..|..|    .::|..:|::|:|.||.:::......
Yeast   160 AELVIAEIISLARQLGDRSIELHTGTWNKVAARCW----EVRGKTLGIIGYGHIGSQLSVLAEAM 220

  Fly   195 KPTEITYTTRSLRPKEAAAVNARHVD-FDEMLRESDLIVVCCALTPETKEIFNATAFQKMKPNCI 258
            ....:.|...::    .|...||.|. .||:|.:||.:.:....||||:::.:|..|..||....
Yeast   221 GLHVLYYDIVTI----MALGTARQVSTLDELLNKSDFVTLHVPATPETEKMLSAPQFAAMKDGAY 281

  Fly   259 LINTARGGVVDQKALYEALKTKRILAAGLDVTTPEPLPIDD------------PLLKLDNVVILP 311
            :||.:||.|||..:|.:|:|..:|..|.|||...||....:            .|:.|.|:::.|
Yeast   282 VINASRGTVVDIPSLIQAVKANKIAGAALDVYPHEPAKNGEGSFNDELNSWTSELVSLPNIILTP 346

  Fly   312 HIGSADIETRKEMSRITARNILAALAGDKMVAE 344
            |||.:..|.:..:      .|..|.|..|.:.|
Yeast   347 HIGGSTEEAQSSI------GIEVATALSKYINE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1236NP_649579.2 GDH 27..338 CDD:240626 80/324 (25%)
LdhA 27..338 CDD:223980 80/324 (25%)
SER3NP_011004.3 PRK11790 59..469 CDD:236985 83/331 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341439
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53501
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.810

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