DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1236 and HPR

DIOPT Version :9

Sequence 1:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001185349.1 Gene:HPR / 843129 AraportID:AT1G68010 Length:387 Species:Arabidopsis thaliana


Alignment Length:338 Identity:112/338 - (33%)
Similarity:167/338 - (49%) Gaps:26/338 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSQHKVYVTRPDVDDSGLELL-RKSCQVSTWHETNPVPRSE-LIRVVAGK-DALYCALTDKVDKE 85
            :.:::|..|:|......:.|| .:.|:|...|....:...| :|.::..| |.:...||:...:.
plant    13 NGKYRVVSTKPMPGTRWINLLVDQGCRVEICHLKKTILSVEDIIDLIGDKCDGVIGQLTEDWGET 77

  Fly    86 VLDA---AGPQLKCVATISVGYDHIDVEECRKRGIRVGFTPDVLTDATAELTLALLLATNRRLFE 147
            :..|   ||.  |..:.::|||:::|||...|.||.||.||.|||:.||||..:|.||..||:.|
plant    78 LFSALSKAGG--KAFSNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVE 140

  Fly   148 ANKQVYNGGWKSWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARIVP-FKPTEITYTT-RSLRPK- 209
            |::.:..|.::.|.|....|..|||..||::|.||||...|..:|. ||...|.:.. :|.|.: 
plant   141 ADEFMRGGLYEGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEK 205

  Fly   210 -------------EAAAVNARHVDFDEMLRESDLIVVCCALTPETKEIFNATAFQKMKP-NCILI 260
                         |......|....:|:|||:|||.:...|...|..:.|......||. ..||:
plant   206 FVTAYGQFLKANGEQPVTWKRASSMEEVLREADLISLHPVLDKTTYHLVNKERLAMMKKVEAILV 270

  Fly   261 NTARGGVVDQKALYEALKTKRILAAGLDVTTPEPLPIDDPLLKLDNVVILPHIGSADIETRKEMS 325
            |.:||.|:|:.||.|.||...:...||||...||. :...|....|.:::|||.||...||:.|:
plant   271 NCSRGPVIDEAALVEHLKENPMFRVGLDVFEEEPF-MKPGLADTKNAIVVPHIASASKWTREGMA 334

  Fly   326 RITARNILAALAG 338
            .:.|.|:|..:.|
plant   335 TLAALNVLGRVKG 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1236NP_649579.2 GDH 27..338 CDD:240626 111/333 (33%)
LdhA 27..338 CDD:223980 111/333 (33%)
HPRNP_001185349.1 PLN02306 1..387 CDD:177941 112/338 (33%)
LdhA <88..357 CDD:223980 95/261 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53501
OrthoDB 1 1.010 - - D1378766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100397
Panther 1 1.100 - - O PTHR10996
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.790

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