DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1236 and FDH

DIOPT Version :10

Sequence 1:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_196982.1 Gene:FDH / 831330 AraportID:AT5G14780 Length:384 Species:Arabidopsis thaliana


Alignment Length:252 Identity:71/252 - (28%)
Similarity:118/252 - (46%) Gaps:13/252 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LKCVATISVGYDHIDVEECRKRGIRVGFTPDVLTDATAELTLALLLATNRRLFEANKQVYNGGWK 158
            ||.:.|..:|.||||::.....|:.|.........:.||..|..:|...|.......||..|.| 
plant   120 LKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEW- 183

  Fly   159 SWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARIVPFKPTEITYTTRSLRPKEAAAVNARHV-DFD 222
            :.|.:......|:|..:|.:|.||||:.:..|:.||....:.:....:.|:......|:.| |.:
plant   184 NVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLN 248

  Fly   223 EMLRESDLIVVCCALTPETKEIFNATAFQKMKPNCILINTARGGVVDQKALYEALKTKRILAAGL 287
            |||.:.|:||:...||.:|:.:||.....|:|...:::|.|||.:::::|:.:|:::..|.....
plant   249 EMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSG 313

  Fly   288 DVTTPEPLPIDDPLLKLDNVVILPHIGSADIETRKEMSRITARNILAALAGDKMVAE 344
            ||..|:|.|.|.|...:.|..:.||.....|:.:           |...||.|.:.|
plant   314 DVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQ-----------LRYAAGTKDMLE 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1236NP_649579.2 GDH 27..338 CDD:240626 67/244 (27%)
FDHNP_196982.1 PLN03139 2..384 CDD:178684 71/252 (28%)

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