DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1236 and grhpr.2

DIOPT Version :10

Sequence 1:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001007896.1 Gene:grhpr.2 / 493279 XenbaseID:XB-GENE-5815683 Length:328 Species:Xenopus tropicalis


Alignment Length:328 Identity:166/328 - (50%)
Similarity:215/328 - (65%) Gaps:7/328 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSQH-KVYVTRPDVDDSGLELLRKS-CQVSTWHETNPVPRSELIRVVAGKDALYCALTDKVDKEV 86
            :.|| ||:||| .:...|.:||.:: ..|..|.....:||.||::.:.|...|.|.|||.:||.|
 Frog     4 TQQHMKVFVTR-RIPPEGQKLLSQAGINVQQWDSDEVIPREELLKGIEGAHGLLCLLTDTIDKGV 67

  Fly    87 LDAAGPQLKCVATISVGYDHIDVEECRKRGIRVGFTPDVLTDATAELTLALLLATNRRLFEANKQ 151
            :|||||.||.::|:|||:||:..:|.::|||:||.||||.|||||||.:.|||.|.|||.||.::
 Frog    68 MDAAGPNLKVISTLSVGFDHLATDEIKRRGIKVGATPDVSTDATAELAVTLLLTTCRRLPEAIEE 132

  Fly   152 VYNGGWKSWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARIVPFKPTEITYTTRSLRP--KEAAAV 214
            |.|||||:||||||||.||..|.||::|.||||..||.|:.||......||  .:.|  |....:
 Frog   133 VRNGGWKTWAPMWMCGYGLSDSTVGVIGLGRIGLAIAQRLKPFGVKRFLYT--GIPPCLKSVEEL 195

  Fly   215 NARHVDFDEMLRESDLIVVCCALTPETKEIFNATAFQKMKPNCILINTARGGVVDQKALYEALKT 279
            .|..|..:::..|||.::|.|.|||||..:.|...||:||...:.|||:||.||:|:.||:||.:
 Frog   196 KAELVSTEKLAEESDFVLVSCPLTPETVGLCNKDFFQRMKKTAVFINTSRGPVVNQEDLYQALVS 260

  Fly   280 KRILAAGLDVTTPEPLPIDDPLLKLDNVVILPHIGSADIETRKEMSRITARNILAALAGDKMVAE 344
            .:|.|||||||||||||.|.|||.|.|.|||||||||....|..||.:..:|:|..|||:.|...
 Frog   261 GQIAAAGLDVTTPEPLPTDHPLLTLKNCVILPHIGSATHGARNAMSVLAVKNLLKGLAGEVMPGG 325

  Fly   345 VEL 347
            :||
 Frog   326 LEL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1236NP_649579.2 GDH 27..338 CDD:240626 160/314 (51%)
grhpr.2NP_001007896.1 GDH 8..319 CDD:240626 159/313 (51%)

Return to query results.
Submit another query.