DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1236 and grhprb

DIOPT Version :10

Sequence 1:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_991248.2 Gene:grhprb / 402985 ZFINID:ZDB-GENE-040426-1847 Length:361 Species:Danio rerio


Alignment Length:362 Identity:187/362 - (51%)
Similarity:234/362 - (64%) Gaps:23/362 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RLPFGQVRNL---LIQGHIIRRMSSQHKVYVTR---PDVDDSGLELLRKSCQV--STWHETNPVP 60
            |...|:::.:   .:.|| .|.||:..||||||   ||    ||::||||.||  ..|...:|||
Zfish     5 RTALGRLQRIAPCTVTGH-HRAMSALPKVYVTRRIPPD----GLDILRKSGQVQFELWDSDDPVP 64

  Fly    61 RSELIRVVAGKDALYCALTDKVDKEVLDAAGPQLKCVATISVGYDHIDVEECRK----------R 115
            |.||:..|.|.|.:.|.||:|:|.::||.|||.||.::|:||||||:.:||.:|          |
Zfish    65 RVELLNKVKGCDGILCVLTEKIDAQLLDVAGPNLKVLSTMSVGYDHLSLEELKKSLLIWACIFCR 129

  Fly   116 GIRVGFTPDVLTDATAELTLALLLATNRRLFEANKQVYNGGWKSWAPMWMCGQGLKGSRVGLLGF 180
            |||||:||:|||||.||||:||||||:|||.||..:...|||.:|..||:||..|..|.||:||.
Zfish   130 GIRVGYTPEVLTDAVAELTVALLLATSRRLIEATHEAKTGGWGTWRTMWLCGHELANSTVGILGL 194

  Fly   181 GRIGQEIAARIVPFKPTEITYTTRSLRPKEAAAVNARHVDFDEMLRESDLIVVCCALTPETKEIF 245
            ||||..||.|:.|||..:..||....|.:.|..:||.:|..||:.::||.:.:||||||||..|.
Zfish   195 GRIGVAIAERLKPFKVKKFIYTDVEPRTELANMINAEYVSLDELAKQSDFLAICCALTPETHGIC 259

  Fly   246 NATAFQKMKPNCILINTARGGVVDQKALYEALKTKRILAAGLDVTTPEPLPIDDPLLKLDNVVIL 310
            |...|.|||.|.|.|||:|||||:|:.|||||.|..|..||||||||||||...||..|.|.|||
Zfish   260 NWNLFSKMKKNAIFINTSRGGVVNQEDLYEALSTGLIAGAGLDVTTPEPLPTHHPLYTLKNCVIL 324

  Fly   311 PHIGSADIETRKEMSRITARNILAALAGDKMVAEVEL 347
            |||.||...||..||.:.|.|:||.|.|:.|..|::|
Zfish   325 PHIASASYTTRNAMSALAANNLLAGLRGEAMPKELKL 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1236NP_649579.2 GDH 27..338 CDD:240626 176/325 (54%)
grhprbNP_991248.2 GDH 30..352 CDD:240626 176/325 (54%)

Return to query results.
Submit another query.