DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2100 and AT2G17580

DIOPT Version :9

Sequence 1:NP_001163512.1 Gene:CG2100 / 40707 FlyBaseID:FBgn0037369 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_179349.2 Gene:AT2G17580 / 816265 AraportID:AT2G17580 Length:757 Species:Arabidopsis thaliana


Alignment Length:527 Identity:116/527 - (22%)
Similarity:211/527 - (40%) Gaps:151/527 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FRKVATPE--FKSIFTPELN-DLVALFKKYDYELRIAGGAVRDILMGIPPKDIDLATTATPDQMK 121
            ::||...:  .|:...||.: :::.|.::..::..:.||.|||:::...|||.|:.|||...|::
plant    59 WKKVRASDAGIKNSMIPESSMNVLRLLRRQGFDAYLVGGCVRDLILNRVPKDYDVITTADLKQIR 123

  Fly   122 QMFEKEEV--------------RMINANGEKHGTITPRINDKE-NFEVTTLRIDIRTDGRHAEVM 171
            ::|.:.:|              .:|..:  ...|:....:|.| :.|.:.:.:|.:.:..::...
plant   124 RLFHRAQVIGKRFPICHVWMGGSIIEVS--SFDTVAHSDSDLEKSKEKSGVSLDTKANKNNSLFK 186

  Fly   172 YTTDWQL-DANR------RDLTINSMFLG-FDGTVYDYFYGYDDLQERRVVFVGEADIRIKEDFL 228
            ..:.|.: |..|      ||.||||:|.. ||.|:|||..|.:||.:.::..:..|.:..|||..
plant   187 MYSGWDIKDCKRWRNSLQRDFTINSLFYNPFDFTIYDYANGMEDLTDLKLRTLVPAHLSFKEDCA 251

  Fly   229 RILRYFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQKIVPGNFGAALFLEMHRC 293
            ||||..|...|:..   :..|....||.|....:|.:...|:..|:..::.....|...|.:.:.
plant   252 RILRGLRIAARLGL---SLSKDVKTAIPEFVSSVANLDQFRLIMEMNYMLAYGAAAPSILLLMKF 313

  Fly   294 NLFEYIGLP-KEPYLDEFD-----------RLCKALDQF---EKPHQPILYL------------- 330
            .|. ::.|| :..|||:..           ||...:|:.   ::|..|.|::             
plant   314 KLL-HVLLPFQAAYLDQASKTSLSSSLMLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNP 377

  Fly   331 ---------AGMLH------SVEDAMEMHK--------RLKLSAYER---DLARFITQEREKVGS 369
                     |.:|:      :||.|.| |:        .:..|:.:|   |||..:        |
plant   378 QEAIVVRAFAALLYHGNWSKAVEFARE-HETSVIGYAPEVSKSSRKRSDEDLAEAV--------S 433

  Fly   370 QYT-TLRDYQKLCLQK-------YIQRDFVEQLLKYSG--------------------KLELYNQ 406
            ::| .|:|.|.:...|       |:..||     |:||                    .:|.|..
plant   434 EFTCLLKDTQYVLTDKEALREALYLYPDF-----KFSGLVFIPKKKGRDVAEGFMRLSDVESYES 493

  Fly   407 LKSWVKPDFPI--RGNALAQRGLNGMRLGLVMDELKLLWADSDFQLTHDDLLKWIPNVLKK---- 465
            .|.....|:.:  :||....|.:.|.   :::|           .:|...:::.:.:|.||    
plant   494 QKEGFSIDYVLLGKGNPCEVRFVLGK---IILD-----------TITEGTVIEPLNSVKKKQSTR 544

  Fly   466 ---IPSA 469
               :|:|
plant   545 NHIVPAA 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2100NP_001163512.1 PcnB 71..465 CDD:223690 109/501 (22%)
NT_ClassII-CCAase 73..210 CDD:143388 43/160 (27%)
PolyA_pol_RNAbd 248..302 CDD:289399 10/53 (19%)
AT2G17580NP_179349.2 NT_ClassII-CCAase 80..231 CDD:143388 39/152 (26%)
PolyA_pol_RNAbd 264..327 CDD:289399 12/66 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4205
eggNOG 1 0.900 - - E1_COG0617
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D730946at2759
OrthoFinder 1 1.000 - - FOG0001890
OrthoInspector 1 1.000 - - otm3201
orthoMCL 1 0.900 - - OOG6_103014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1426
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.680

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