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Protein Alignment CG1239 and Bcdin3d

DIOPT Version :9

Sequence 1:	NP_001287185.1	Gene:	CG1239 / 40706	FlyBaseID:	FBgn0037368	Length:	300	Species:	Drosophila melanogaster
Sequence 2:	NP_083512.2	Gene:	Bcdin3d / 75284	MGIID:	1922534	Length:	285	Species:	Mus musculus

Alignment Length:	231	Identity:	63/231 - (27%)
Similarity:	94/231 - (40%)	Gaps:	77/231 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    77 YGNYKHYYGKRILNKDFH--DIRLDVLGTQPDLFRNKQL-------------LDIGCNSGHLSIQ 126
            :||:.||       ..||  :.||.:|  .|:|.|  ||             ||:|||||.||:.
Mouse    31 FGNFPHY-------SRFHPPEQRLRLL--PPELLR--QLFPPEGPEKRPILGLDVGCNSGDLSVA 84

  Fly   127 IARKF--------------EVKSLVGLDIDRGLINDAQK--------TVSHLKRHATPGQGIPHI 169
            :.:.|              |::.|. .|||..|:..|::        |...|.......:.:|..
Mouse    85 LYKHFLSPRDGETCSGASRELRILC-CDIDPVLVERAERDCPFPEALTFITLDIMDQESRKVPLS 148

  Fly   170 QFVHGNYVLEDDVLLEIERPQFDVILCLSVTKWIHLNFCDSGLKQAFRRM-----YLQLRPGGKL 229
            .|           |.:..|..||::.|:|||.|||||..|.||.:....:     |        |
Mouse   149 SF-----------LSQFGRSVFDMVFCMSVTMWIHLNHGDRGLCEFLAHVSSLCSY--------L 194

  Fly   230 ILEPQSFDGY----KRRKKLSEQIRDNYNAIKFRPD 261
            ::|||.:..|    :|.:||.....|::.::..|.|
Mouse   195 LVEPQPWKCYRAAARRLRKLGLHSFDHFRSLAIRGD 230

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.