DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1239 and Bcdin3d

DIOPT Version :10

Sequence 1:NP_649577.1 Gene:CG1239 / 40706 FlyBaseID:FBgn0037368 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001102221.1 Gene:Bcdin3d / 363001 RGDID:1306433 Length:285 Species:Rattus norvegicus


Alignment Length:230 Identity:64/230 - (27%)
Similarity:93/230 - (40%) Gaps:75/230 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 YGNYKHYYGKRILNKDFH--DIRLDVLGTQPDLFRNKQL-------------LDIGCNSGHLSIQ 126
            :||:.||       ..||  :.||.:|  .|:|.|  ||             ||:|||||.||:.
  Rat    31 FGNFPHY-------SRFHPPEQRLRLL--PPELLR--QLFPPEGPERRPILGLDVGCNSGDLSMA 84

  Fly   127 IARKF------EVKS-------LVGLDIDRGLINDAQK--------TVSHLKRHATPGQGIPHIQ 170
            :.:.|      |..|       |:..|||..|:..|:.        |...|.......:.:|...
  Rat    85 LYKHFLSPHDGETSSGTSRELRLLCCDIDPVLVERAENGCRFPDALTFITLDIMDQESRKVPLSS 149

  Fly   171 FVHGNYVLEDDVLLEIERPQFDVILCLSVTKWIHLNFCDSGLKQAFRRM-----YLQLRPGGKLI 230
            |           |.:..|..||::.|:|||.|||||..|.||.:....:     |        |:
  Rat   150 F-----------LSQFGRSVFDIVFCMSVTMWIHLNHGDRGLCEFLAHVSSLCSY--------LL 195

  Fly   231 LEPQSFDGY----KRRKKLSEQIRDNYNAIKFRPD 261
            :|||.:..|    :|.:||.....|::.::..|.|
  Rat   196 VEPQPWKCYRAAARRLRKLGLHNFDHFRSLAIRGD 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1239NP_649577.1 UbiG 90..232 CDD:441829 50/182 (27%)
Bin3 191..299 CDD:462022 26/80 (33%)
Bcdin3dNP_001102221.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Methyltransf_25 72..187 CDD:463945 38/125 (30%)
Bin3 159..264 CDD:462022 26/80 (33%)
Blue background indicates that the domain is not in the aligned region.

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