DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and RABGAP1L

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_001353375.1 Gene:RABGAP1L / 9910 HGNCID:24663 Length:1051 Species:Homo sapiens


Alignment Length:1160 Identity:244/1160 - (21%)
Similarity:448/1160 - (38%) Gaps:269/1160 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 DDSQDSQAKPLVQLQLTGAEEGAAPRPLEDNKEN--KSPEKRP---LLRGQSQIELGHKEHSDGS 450
            |:|...:.||.:::...|.|:      ||...|.  :..||||   |:..||..|:  .:||.|.
Human    34 DNSTKHEEKPQLKIVSNGDEQ------LEKAMEEILRDSEKRPSSLLVDCQSSSEI--SDHSFGD 90

  Fly   451 QPLAANSQLEAPNVIV-----NKQPTPPRDQGVG---------------TGTASASAGPSQLHPN 495
            .|.   ||...|::.:     |.:.:.||....|               .|....|:..:::...
Human    91 IPA---SQTNKPSLQLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEAL 152

  Fly   496 YAMDNIPKQRDRSASQGCIPP--YVEQNRTMVFLVGRCDLRLISPDRK-QVLLYKDFKDVASCVH 557
            .||..:     :|:||...|.  ||..       |....:|:|..... ::..:..:| |..|..
Human   153 RAMATM-----KSSSQYPFPVTLYVPN-------VPEGSVRIIDQSSNVEIASFPIYK-VLFCAR 204

  Fly   558 GQKSLDHFGIICRELNNDGYIGYVFKCQSEHVCDDIVAAIAQAFDTCAEQKKKQDTQIFSCE--H 620
            |               :||        .:|..|        .||...:...::....:||||  .
Human   205 G---------------HDG--------TTESNC--------FAFTESSHGSEEFQIHVFSCEIKE 238

  Fly   621 CPMLWYHKLCTDVEGLSEKKTQALILRRIETLSDDEQEIVWAKFCGSEKTNSPVAEQNQFLMMLL 685
            ......:..||..:            |....:||.:..::            |..:.:.|...:.
Human   239 AVSRILYSFCTAFK------------RSSRQVSDVKDSVI------------PTPDSDVFTFSVS 279

  Fly   686 RAHCESRQQRHVHDTAENRSEFLNQYLGGSTIFMKAKRSLTNSFDNLLKRKPSKDDIAV------ 744
            ....|...:.:.....::|.:|          :.|.|:.:.......:::..:| ::|:      
Human   280 LEVKEDDGKGNFSPVPKDRDKF----------YFKLKQGIEKKVVITVQQLSNK-ELAIERCFGM 333

  Fly   745 ---PSHNLRDIREGSAEPLGTQSPPEGFRSRSNTVGASPSSKPTAEQLKSPMMDIFIKVG-NSPK 805
               |.   |:::......|..:|..:.:..|:..:..          :.:|...:|:.:. .:||
Human   334 LLSPG---RNVKNSDMHLLDMESMGKSYDGRAYVITG----------MWNPNAPVFLALNEETPK 385

  Fly   806 EAETHQGSWRQAILNSVVTPSKGLDSEVP-----------------TE-FLSPMRKPAKRGKRDA 852
            :.:.:.......::..||.|.:.|...|.                 || |...:::...:|..:|
Human   386 DKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHTNA 450

  Fly   853 AELRELWRTAIRQTIMLNRMETENAML---------------QARQNENELKRIKLDYEEIVPCD 902
            .:       ||.:.:.|.|...:...:               ...:::|||.....|..:  .|.
Human   451 GD-------AIYEVVSLQRESDKEEPVTPTSGGGPMSPQDDEAEEESDNELSSGTGDVSK--DCP 506

  Fly   903 KQLIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKRFPN 967
            ::::..|.:::.:..:.:|.:  ||.|...:::|||.:.|.:||..||..|. |.|.:|.     
Human   507 EKILYSWGELLGKWHSNLGAR--PKGLSTLVKSGVPEALRAEVWQLLAGCHD-NQAMLDR----- 563

  Fly   968 FNTPYHMLLKHLTEHQHAIFIDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLG 1032
                |.:|:...:..:..|..|:.||||.|.::||..|.||.||:.:.||||:.|.::|||||..
Human   564 ----YRILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQS 624

  Fly  1033 FICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQND 1097
            |:..|||||..|..:|.:|..:|:...:|..|..:.:....:.|||.||:::.||||:......:
Human   625 FLAAVLLLHMPEEQAFCVLVKIMYDYGLRDLYRNNFEDLHCKFYQLERLMQEQLPDLHSHFSDLN 689

  Fly  1098 VSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMD 1162
            :...:||:.|.||:|:::|||..|..:.|||..|..::||..|:|||...|:.||..| ||..:.
Human   690 LEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQAD-FEGALK 753

  Fly  1163 YLKTVVPK-----------MEHTCMEQIMKLVFSMDIGKQLAEYKVEYNVLQEEITTTNHHLEML 1216
            :.:..:||           ||..|..::..        |:|.:|:.||..::|........::..
Human   754 FFRVQLPKRYRAEENARRLMEQACNIKVPT--------KKLKKYEKEYQTMRESQLQQEDPMDRY 810

  Fly  1217 NREKTQNQHLEQQLQFAQSSIA-QLETTRSSQQAQITTLQSQV----QSLELTIQTLGRYVGQLV 1276
            .||..:.|....:|:.....:| :|.|::.:.:..:...:.:.    :.|.||.|.|        
Human   811 KRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLLTKQRL-------- 867

  Fly  1277 EHNPDLELPNEVRRMLQQLDDLDRQRRKPI-FTERKIGKSVSVNSHLGFPLKVLEELTERDELGS 1340
                 :|...|.|:..::...|....||.: ..|.:|.|:.::.:........|....|:.:..|
Human   868 -----VETEEEKRKQEEETAQLKEVFRKQLEKAEYEIKKTTAIIAEYKQICSQLSTRLEKQQAAS 927

  Fly  1341 PQ-----KQKKEKTPFFEQLRQQQQQHRLNGGGQSSNVGESGSPTPPSRPN-----RLLDNASAR 1395
            .:     |.|.........:..::...:|...|:.    :.|..|...:.:     |.::...|:
Human   928 KEELEVVKGKMMACKHCSDIFSKEGALKLAATGRE----DQGIETDDEKDSLKKQLREMELELAQ 988

  Fly  1396 TVMQV-----KLDELKLPEHVDKFVAN----------IKSPLEVDSGVGT-PLSP 1434
            |.:|:     |:.||   ||....:.|          .|:...:.:..|| ||.|
Human   989 TKLQLVEAKCKIQEL---EHQRGALMNEIQAAKNSWFSKTLNSIKTATGTQPLQP 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 49/237 (21%)
DUF3350 831..880 CDD:463365 10/81 (12%)
TBC 933..1152 CDD:214540 80/218 (37%)
COG4372 <1190..>1353 CDD:443500 32/173 (18%)
RABGAP1LNP_001353375.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 4/17 (24%)
PTB_Rab6GAP 129..257 CDD:269922 30/183 (16%)
DUF3694 290..421 CDD:463599 20/154 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..503 5/41 (12%)
TBC 535..744 CDD:214540 80/218 (37%)
Smc <794..>1020 CDD:440809 41/245 (17%)

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