DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and SGSM2

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_011522403.1 Gene:SGSM2 / 9905 HGNCID:29026 Length:1103 Species:Homo sapiens


Alignment Length:878 Identity:149/878 - (16%)
Similarity:274/878 - (31%) Gaps:315/878 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 EGGVGIEAKPSSSLKSHDLKE------EDEEEQEQHKGH--------------------DDSQDS 396
            :|.|..:.:..||::|.|::|      .|...:..:.||                    ||.::.
Human   433 KGKVFPKLRKRSSIRSVDMEEMGTGRATDYVFRIIYPGHRHEHITINYHHLAASRAASVDDDEEE 497

  Fly   397 QAKPLVQLQLTGAEEGAAPRPLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQLEA 461
            :.|....|.:..:....||.|::|              ....||:      .|..|......|| 
Human   498 EDKLHAMLSMICSRNLTAPNPMKD--------------AGDMIEM------QGFGPSLPAWHLE- 541

  Fly   462 PNVIVNKQPTPPRDQGVGTGTASASAGPSQLHPNYAMDNIPKQRDRSASQGCIPPYVEQNRTMVF 526
                      |...||....:.|:|:.| ...|::.              .|||           
Human   542 ----------PLCSQGSSCLSCSSSSSP-HATPSHC--------------SCIP----------- 570

  Fly   527 LVGRCDLRLISPDRKQVLLYKDFKD-VASCVH------GQKSLDHFGIICRE--------LNNDG 576
              .|..|||:....|:.::.:.|.. :|.|.|      ...:|.|..:|..:        |..|.
Human   571 --DRLPLRLLCESMKRQIVSRAFYGWLAHCRHLSTVRTHLSALVHHSVIPPDRPPGASAGLTKDV 633

  Fly   577 YIGYVFKCQSEHVCDDIVAAIAQAFDTCAEQKKKQDTQIFSCEHCPMLWYHKLCTDVEGLSEKKT 641
            :..|    |.:......:..:.|.:....|.:.::|...|      :|.::|.     |:|:|: 
Human   634 WSKY----QKDKKNYKELELLRQVYYGGIEHEIRKDVWPF------LLGHYKF-----GMSKKE- 682

  Fly   642 QALILRRIETLSDDEQEIVWAKFCGSEKTNSPVAEQNQFLMMLLRAHCE---SRQQRHVHDTAEN 703
                                     .|:.::.||.:.|.::...:| ||   .:::|..|.....
Human   683 -------------------------MEQVDAVVAARYQQVLAEWKA-CEVVVRQREREAHPATRT 721

  Fly   704 RSEFLNQYLGGSTIFMKAKRSL----TNSFDNLLKRKPSKDDIAVPS-HNLRDIREGSAEPLGTQ 763
            :      :..||:|....:|.:    |.|.|..:    |.||:..|. .:..|.|....:..|..
Human   722 K------FSSGSSIDSHVQRLIHRDSTISNDVFI----SVDDLEPPEPQDPEDSRPKPEQEAGPG 776

  Fly   764 SPPEGFRSRSNTV------GASPSSK--PTAEQLKSPMMDIFIKVGNSPKEAETHQGSWRQAILN 820
            :|......:.::|      ...|||:  ..|..::| .:|....||...::....:||       
Human   777 TPGTAVVEQQHSVEFDSPDSGLPSSRNYSVASGIQS-SLDEGQSVGFEEEDGGGEEGS------- 833

  Fly   821 SVVTPSKGLDSEVPTEFLSPMRKPAKRGKRDAAELREL-------WRTAIRQTIMLNRMETENAM 878
                ...|..:....|...|.::..:.|:.:|.|  ||       :...:..|:.||        
Human   834 ----SGPGPAAHTLREPQDPSQEKPQAGELEAGE--ELAAVCAAAYTIELLDTVALN-------- 884

  Fly   879 LQARQNENELKRIKLDYEEIVPCDKQLIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRG 943
                     |.||..|.:.   ||:                                        
Human   885 ---------LHRIDKDVQR---CDR---------------------------------------- 897

  Fly   944 DVWTFLAEQHSMNTAPVDTKRFPNFNTPYHMLLKHLTEHQHAIFIDLGRTFPNHQFYKDPLGLGQ 1008
            :.|.|..               ||......::..::.||                          
Human   898 NYWYFTP---------------PNLERLRDVMCSYVWEH-------------------------- 921

  Fly  1009 LSLFNLLKAYSILDPELGYCQGLGFICGVLLLHCD-EANSFQLLKHLMFRRNMRTKYLPDMKKFQ 1072
                        ||  :||.||:..:...||:..| :..::....|||.|.:..   .|:.....
Human   922 ------------LD--VGYVQGMCDLLAPLLVTLDNDQLAYSCFSHLMKRMSQN---FPNGGAMD 969

  Fly  1073 LQLYQLSRLVKDHLPDLYVWLDQN-DVSPTLYAAPWILTVFSSQFPLGFVARVFDLLF----LES 1132
            .....:..|::....:|:..:.|| |.:...:...|.|..|..:.....|..|:::::    :.|
Human   970 THFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWAARHISS 1034

  Fly  1133 SDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLK 1165
            ...:...|:||:..:::  :.:||..:..|.:|
Human  1035 EHFVLFIALALVEAYRE--IIRDNNMDFTDIIK 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 51/283 (18%)
DUF3350 831..880 CDD:463365 10/55 (18%)
TBC 933..1152 CDD:214540 34/224 (15%)
COG4372 <1190..>1353 CDD:443500
SGSM2XP_011522403.1 RUN 18..243 CDD:459241
PH_RUTBC 302..470 CDD:275431 8/36 (22%)
TBC <885..1053 CDD:214540 40/270 (15%)
Blue background indicates that the domain is not in the aligned region.

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