DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and GYL1

DIOPT Version :9

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_013917.1 Gene:GYL1 / 855230 SGDID:S000004804 Length:720 Species:Saccharomyces cerevisiae


Alignment Length:732 Identity:157/732 - (21%)
Similarity:284/732 - (38%) Gaps:180/732 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   720 KAKRSLTNSFDNLLKRKPSKDDIAV-----PSHNLRD--IREGS-----------AEPLGTQ--- 763
            |.:.:.||:..|....:.:||..::     |...|..  :||.|           ::.|.|:   
Yeast    50 KVEMATTNASSNFGSNESAKDGESIGAFSNPHEALMQSKLREESQSKTILPSDDLSQQLETEESK 114

  Fly   764 ---------SPPEGFRSRSNTVGASPSSKPTAEQLKSPMMDIFIKVGNSPKEAETHQGSWRQAIL 819
                     |||  ...|::.:..|.|:      |||.:..:.....|.....:..|...||.:.
Yeast   115 VEEALKRITSPP--LPPRADCIEESASA------LKSSLPPVLAGNKNDQAPLDRPQLPPRQVVN 171

  Fly   820 NSVV---------TPSKGLDSEVPTEFLS-PMRKPAKR--GKRDAAELRELWRTAIRQTIMLNRM 872
            ...:         ||||...|.|.....| |...|.:|  ...|.|..:....:..::.::..:.
Yeast   172 AETLHLKAPHGNATPSKSPTSAVGNSSSSTPPTLPPRRIEDPLDLAAQKHFLASTFKRNMLFYKS 236

  Fly   873 ETENAMLQARQNENELKR--IKLDYEEIVPCDKQLIERWEQIIERNSTQIGNKKDPKVLGHAIRT 935
            |..:......:|...||.  .|::..||   .:::...|.::|......:.|  |.:.|...:..
Yeast   237 EDNSIKCDLDKNILNLKEDSKKINNNEI---PEEVSSFWLKVIGDYQNILIN--DIETLHFQLSR 296

  Fly   936 GVPRSKRGDVWTFLA-----------EQHSMNTAPVDTKRFPNFNTPYHMLLKHLTEHQHAIFID 989
            |:|.:.|..||..::           |.:....||.|.:.|.|       .||.:.|        
Yeast   297 GIPAAYRLVVWQLVSYAKSKSFDPIYETYLTEMAPFDVQEFEN-------QLKMMDE-------- 346

  Fly   990 LGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLGFICGVLLLHC-DEANSFQLLKH 1053
                .|: ::.|        .:.|:||||.:.|||..:...:.:|..::|..| :|||:|.||..
Yeast   347 ----VPS-EYVK--------RISNVLKAYLLFDPECEFSTDIAYIINMILDVCEEEANAFGLLVR 398

  Fly  1054 LMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFPL 1118
            ||....:|..:||...:..:..|:..|||::..|:::..:.:..|..:::...:..|:|..:.|.
Yeast   399 LMKVYGLRLLFLPSASEIDILCYKFDRLVEEFYPEIHNHMVEKGVRSSMFLPGFFTTLFQKKLPT 463

  Fly  1119 GFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVV--------------P 1169
            ....|:.|::|||..|.|.:....|||..:..|| |..|:::::.||:.:              .
Yeast   464 EIQPRIGDMVFLEGIDSIMRILATLLSNSRDHLL-KMGFDDMLELLKSGLLDAYIKQNDGTRGDT 527

  Fly  1170 KMEHTCMEQI-----MKLVFSMDIGKQLAEYKVEY----------NVLQEEITTTNHHLE----- 1214
            .:.:.||:::     ||:..:   .|.:.:|..||          .|..:.||..|.||:     
Yeast   528 LLSNECMDKLLQDSMMKVAIT---PKTMKKYSSEYEEIHRLDNEKEVQYKSITEKNLHLQKHVRK 589

  Fly  1215 ------MLNREKT--QNQHLEQQLQFAQSSIAQLETTRSSQQAQITTLQSQVQSLELTIQTLGRY 1271
                  .||||..  .|:.::.:|     :|..:....:..:.||..|:.::.| |...|.||.|
Yeast   590 LENDYTSLNREHVTIANELVKNRL-----NIESVLNENNGYKLQILDLKKKLDS-EKKKQVLGVY 648

  Fly  1272 VGQLVEHNPDLELPNEVRRMLQQLDDLDRQRRKPIFTERKIGKSVSVNSHLGFPLKVLEELTERD 1336
            |            ||::::.|::             |.:|..:.:..|      ||:.:.::|.:
Yeast   649 V------------PNDLKKDLEE-------------TMKKNTQVMDEN------LKLQDRISELE 682

  Fly  1337 ELGSPQKQKKEKTPFFE 1353
            .|....|...:....||
Yeast   683 RLIEEIKTANKNGTLFE 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 835..880 CDD:288663 7/47 (15%)
TBC 933..1152 CDD:214540 57/230 (25%)
RILP-like <1176..1267 CDD:304877 25/118 (21%)
GYL1NP_013917.1 COG5210 27..569 CDD:227535 121/563 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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