DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and MSB4

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_014529.1 Gene:MSB4 / 854037 SGDID:S000005472 Length:492 Species:Saccharomyces cerevisiae


Alignment Length:396 Identity:98/396 - (24%)
Similarity:166/396 - (41%) Gaps:89/396 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   907 ERWEQIIERNSTQIGNKKDPKV-------LGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKR 964
            ::||..:.:|..::.| .:|.|       |...:|.|:|...||:.|.:.|.......|.|..  
Yeast   112 KKWENFLLKNKIELHN-DNPLVYPARTDELSKFVRKGIPAEWRGNAWWYFAGGQRQLDANVGV-- 173

  Fly   965 FPNFNTPYHMLLKHLTE------HQHAIFIDLGRTFP-NHQFYKDPLGLGQ----LSLFNLLKAY 1018
                   |..|.....|      ...||..||.|||| |..|:|:....|:    .||..:|.|:
Yeast   174 -------YDRLKSDCREGAVSGKDMEAIERDLYRTFPDNIHFHKESFQNGEPAIIRSLRRVLMAF 231

  Fly  1019 SILDPELGYCQGLGFICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLP-----DMKKFQLQLYQL 1078
            |:.|..:||||.:.|:.|:|||..:|..:|.:|..:      ..||||     |::...:....|
Yeast   232 SVYDKTIGYCQSMNFLVGLLLLFMEEEKAFWMLVII------TGKYLPGVYESDLEGANVDQGVL 290

  Fly  1079 SRLVKDHLPDLYVWLDQNDVSP-----------------------TLYAAPWILTVFSSQFPLGF 1120
            ...:|::||:::..::.:.::.                       ||..|.|.::.|....|:..
Yeast   291 VLCIKEYLPEIWSHIESSYMNGNGSTDQISGPASGEEYLCRLPTLTLCTASWFMSCFVGVVPIET 355

  Fly  1121 VARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDN---FEEIMDY--------------LKTVV 1168
            ..|::|.||.|.|..:||.|:.:|.:.:.:.|...:   |.:...|              ||..:
Yeast   356 TLRIWDCLFYEESHFLFKVALGILKLSESEFLESKSQKLFRQYSSYTFGGSNDSDSTFKRLKNKI 420

  Fly  1169 PKMEHTCME--QIM-----KLVFSMDI-GKQLAEYKVEYN-VLQEEITTTNHHLEML-NREKTQN 1223
            ...|...||  |::     :|:...|| .|.|.:.||..| :.||:|.....::.|. ||::..:
Yeast   421 KTQEEADMEILQVIQNFPKRLLNPNDIFEKVLMKKKVALNGITQEKIDRGREYVAMARNRQRASS 485

  Fly  1224 QHLEQQ 1229
            :..|::
Yeast   486 RPKERR 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540 67/257 (26%)
COG4372 <1190..>1353 CDD:443500 12/42 (29%)
MSB4NP_014529.1 COG5210 <53..461 CDD:227535 90/364 (25%)
Blue background indicates that the domain is not in the aligned region.

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