DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and sgsm2

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_068069810.1 Gene:sgsm2 / 799094 ZFINID:ZDB-GENE-131119-52 Length:1057 Species:Danio rerio


Alignment Length:1160 Identity:211/1160 - (18%)
Similarity:360/1160 - (31%) Gaps:418/1160 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 NLKMSEAMRNAQHDTSPNPVSSKMKASKSYTHGLSSSSGTVNIPTSTSAQSNLSLLADISPNHTH 308
            |..:||..|..|.........::...|..........|.|...|...|||:...:..     .|.
Zfish    80 NTTVSEICRKVQEQLQQQAEITRRTQSTGQESLRRQGSSTGRAPQPLSAQAIKHIWV-----RTA 139

  Fly   309 FFEVMYVGKIRVSQKRVPNTFIDDALPKFKAYDAQRLRLLQNRKMSLSSEGG------VGIEAKP 367
            .||       :|..| :....:|:|   .|.|:.:.|       |..|..|.      ||..|..
Zfish   140 LFE-------KVLDK-IVQYIVDNA---SKYYEREAL-------MHDSVFGPILAALLVGPCALE 186

  Fly   368 SSSLKSHDLKEEDEEEQEQHKGHDDSQDSQAKPLVQL-QLTGAEEGAAPRPLEDNKENKSPEKRP 431
            .:.||:.|           |...|.|    |..|||. ::.||..|          :..||.:||
Zfish   187 YTKLKTSD-----------HFWTDPS----ANELVQRHRIHGAHRG----------QEVSPGRRP 226

  Fly   432 LLRGQSQIELG-HKEHSDGS---QPLAANSQLEAPNVIVNKQPTPPRDQGVGTGTASASAGPSQL 492
                    .|| .|..|.||   ...||:::....::..|                      |::
Zfish   227 --------ALGIRKRQSSGSMSEDKFAASAREYVESLHQN----------------------SRV 261

  Fly   493 HPNYAMDNI---PKQRDRSASQGCIPPYVEQNRTMVFL-------------VGRCDLR------- 534
            |..|..:|:   || :|....:|    |:..::|...|             :|.|||.       
Zfish   262 HLLYGKNNVLVQPK-KDMEVLRG----YLSLHQTAETLTLKWTPNQLINGTLGDCDLEKSIYWDY 321

  Fly   535 -LISPDRKQVLLYKDFKDVASCVHGQKSLDHFGIICRELNNDGYIGYVFKCQSEHVCDDIVAAIA 598
             |..|.|:.|           |:|                          |.....|...:..::
Zfish   322 ALTVPLRQIV-----------CIH--------------------------CHQRPDCGGTLVLVS 349

  Fly   599 Q-----------------AFDTCAEQKKKQDTQIFSCEHCPMLW--------YHKL--------C 630
            |                 ||.:|.|.......|:.     |.||        :.||        .
Zfish   350 QDGIQRPPLHFPPGGHLLAFLSCLETGLLPRGQLE-----PPLWSQRGKGKVFPKLRKRNSTARL 409

  Fly   631 TDVEGLSEKKTQALILRRI-----------------------ETLSDDEQE-----IVWAKFCGS 667
            .|.:|..|.:..|..:.||                       .:|.|||:|     .:.:..|..
Zfish   410 VDQDGDGEDQIAADYVFRIVYPGHRHDSTVTINYHHSTGSRAPSLDDDEEEEDRLHAMISMICSR 474

  Fly   668 EKTNSPVAEQNQFLMML----------LRAHCESRQQRHVHDTAENRSEFLNQYLGGSTIFMKAK 722
            ..|:..|.:.:..||.:          .:..|.|           :.|..|:...|||...::..
Zfish   475 NLTDPNVMKDHGDLMEMQGFGGSPLSWQQGECTS-----------HMSSCLSCSTGGSNASVELP 528

  Fly   723 RSLTNSFDNL--------LKRKPSKDDI------------------AVPSHNLRDIREGSAEPLG 761
            .|.|...|.:        :||:......                  |:.:||:            
Zfish   529 ASCTCMHDRIPLKMLCQNMKRQIVSRAFYGWLAYCRHLSTVRTHLSALVNHNI------------ 581

  Fly   762 TQSPPEGFRSRSNTVGASPSSKPTAEQLKSPMMDIFIKVGNSPKEAETHQGSWRQAILNSVVTPS 826
              .||:               || .|.......|::.|.....|       ::::..|..:|...
Zfish   582 --VPPD---------------KP-CEASGGLSKDVWSKYQKDCK-------NYKELELLRLVYYG 621

  Fly   827 KGLDSEVPTEFLSPMRKPAKRG--KRDAAELRELWRTAIRQTIMLNRMETENAMLQARQNENELK 889
             |::.|:..|....:....|.|  |::.|::.|. .||..|.:|   .|.:...:..:|.|.|::
Zfish   622 -GVEHEIRKEVWPFLLGHYKFGMDKKNMAQIDEK-ITARYQQVM---REWKACEVIVKQREKEMQ 681

  Fly   890 R---IKLDYEEIVPCDKQLIERWEQIIERNSTQIGNK---------------------------- 923
            .   .||.....:  |..::    ::|.|:|| |.|:                            
Zfish   682 SAIFAKLSSGSSI--DSHVL----RLIHRDST-ISNEVFMSVDEPDAGGQDTSCEDSTPTLTTVV 739

  Fly   924 --------KDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKR---------------- 964
                    :.|.|...:..:|:|.|:...|    |..||...:.:|..:                
Zfish   740 TPAMLAPDERPLVEFDSPDSGLPSSRNYSV----ASGHSQIMSSIDDGQSMEEDTTPTGGLEEQG 800

  Fly   965 --------------------------FPNFNTPYHMLLKHLTEHQHAIFIDLGRTFPNHQFYKDP 1003
                                      .|:|::....||..:..:.|.|..|:.|...|: :|...
Zfish   801 GRGSLSEDKLCSQLDKLTTTSSSEGTAPSFSSYTIELLDTVALNLHRIDKDVQRCDRNY-YYFTS 864

  Fly  1004 LGLGQLSLFNLLKAYSILDPELGYCQGL-GFICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLPD 1067
            ..|.:|.  |::.:|.....|:||.||: ..:..::::..||..::.....||.|.:..   .|.
Zfish   865 SNLEKLR--NIMCSYVWEHLEIGYVQGMCDLLAPLMVILDDECLAYSCFTQLMRRMSQN---FPT 924

  Fly  1068 MKKFQLQLYQLSRLVKDHLPDLYVWLDQN-DVSPTLYAAPWILTVFSSQFPLGFVARVFDLLF-- 1129
            ..........:..|::....:|:..:.|| |.:...:...|.|..|..:.....|..|:::::  
Zfish   925 GGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWVA 989

  Fly  1130 --LESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVVPKMEHTCMEQIMKL 1182
              :.|...:...|:||:.|::..:|  ||..:..|.:|......|...::.|:::
Zfish   990 PRISSKHFVLFIALALVEVYRDIIL--DNNMDFTDIIKFFNEMAERHDVQHILRM 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 66/351 (19%)
DUF3350 831..880 CDD:463365 12/50 (24%)
TBC 933..1152 CDD:214540 48/266 (18%)
COG4372 <1190..>1353 CDD:443500
sgsm2XP_068069810.1 RUN 19..201 CDD:459241 33/154 (21%)
PH_RUTBC 262..432 CDD:275431 39/216 (18%)
TBC <845..1014 CDD:214540 36/174 (21%)
Blue background indicates that the domain is not in the aligned region.

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