DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and GRTP1

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_001273661.1 Gene:GRTP1 / 79774 HGNCID:20310 Length:344 Species:Homo sapiens


Alignment Length:278 Identity:86/278 - (30%)
Similarity:132/278 - (47%) Gaps:23/278 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   908 RWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKRFPNFNTPY 972
            :|.:::     |.|.....:.:...:|.|||...|..||..|      :.|.....:.|.:   |
Human    45 KWSRLL-----QGGGVPRSRTVKRYVRKGVPLEHRARVWMVL------SGAQAQMDQNPGY---Y 95

  Fly   973 HMLL--KHLTEHQHAIFIDLGRTFP-NHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLGFI 1034
            |.||  :.....:.||..||.|||| |.:|.|......|.:|:|:|.||...:..:|||||:.||
Human    96 HQLLQGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFI 160

  Fly  1035 CGVLLLHC-DEANSFQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDV 1098
            .|.|:|.. :|..||.||..|: .|.:...|.|.|...:.....|..||:..||.:...:::..|
Human   161 AGYLILITNNEEESFWLLDALV-GRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGV 224

  Fly  1099 SPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDY 1163
            ..||..:.|.:.:|....|:..|.|::|.||.|.|.:||:.|:.|:..|::.:|...:..:|.|.
Human   225 LWTLLVSRWFICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDK 289

  Fly  1164 LKTVVP---KME-HTCME 1177
            .|.:..   .|| ||.|:
Human   290 FKQITKGSFVMECHTFMQ 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540 74/222 (33%)
COG4372 <1190..>1353 CDD:443500
GRTP1NP_001273661.1 TBC 65..278 CDD:214540 74/222 (33%)
Blue background indicates that the domain is not in the aligned region.

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