DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and tbc1d2b

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_012822167.2 Gene:tbc1d2b / 734055 XenbaseID:XB-GENE-5932742 Length:944 Species:Xenopus tropicalis


Alignment Length:940 Identity:182/940 - (19%)
Similarity:319/940 - (33%) Gaps:300/940 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 KGHDDSQDSQAKPLVQLQLTGAEEGAAPRPLEDNKENKSPEKRPLLRGQSQ-------IELGHK- 444
            |.|.|:|     ||.|:.:..|.........|...|..|..:..:||..|:       .||..| 
 Frog    69 KHHQDAQ-----PLGQIDIGDASFSYDLEAEEGQFEIHSAGRVSILRAPSRHAMTYWLQELQQKR 128

  Fly   445 -EHSDGSQPLAANSQLEAPNVIVNKQPTPPRDQGVGTGTASASAGPSQLHPNYAMDNIPKQRDRS 508
             |:.:....|...|       ::|     |....|..|..:..:......||  :::..:.|::.
 Frog   129 WEYCNSFGALKRES-------VIN-----PASTKVPIGLVARESPDYMGIPN--INDAERARNQF 179

  Fly   509 ASQGCIPPYVEQNRTMVFLVGRCDLRLISPDRKQVLLYKDFKDVASC---VHGQKSLDHFGIICR 570
            |.:.|  |.|..::|.......      :|...||||.:...|:.|.   :...||.|     ||
 Frog   180 AVETC--PSVLGDQTSAEQASN------NPAAVQVLLRQWSNDIRSSMQHLRPGKSSD-----CR 231

  Fly   571 ELNNDGYIGYVFKCQSE----------------HVCDDIVAAIAQAFDTCAEQKKKQDTQ----- 614
            :        ..|....|                ||                 :|:|..|:     
 Frog   232 K--------STFYTNEEWELLNPTPKELEESLLHV-----------------EKRKPPTEGIKGS 271

  Fly   615 ------IFSCEHCPMLWYHKLCTDVEGLSEKKTQALI------LRRIET-----LSDDEQEIVWA 662
                  .|.....|......| .::.|:::.:|:.|.      ..|:|:     |...|:|:   
 Frog   272 TAGMSFPFDFGRIPQRARRPL-REIMGVNKNRTECLADSLPVSDSRMESDVLLKLQSQEEEL--- 332

  Fly   663 KFCGSEKTNSPVAEQNQFLMML---LRA----------HCESRQQRHVHDTAENRSEFLNQYLGG 714
                 |:....:..|.:.:.:|   ||:          .|:...:.|:|                
 Frog   333 -----ERLKKDLLSQKELVRLLQQSLRSSQYDKYFASPFCDGLSKEHLH---------------- 376

  Fly   715 STIFMKAKRSLTNSFDNLLKRKPSKDDIAVPSHNLRDIREGSAEPLGTQSPPEGFRSRSNTVGAS 779
               .::.|.:.....::||:|:..:.|     |..:::.|                       ..
 Frog   377 ---LLQQKDTQIQELNHLLERQTLEKD-----HLHQEVEE-----------------------LK 410

  Fly   780 PSSKPTAEQLKSPMM------DIFIKVGNSPKEAETHQGSWRQAILNSVVTPSKGLDSEVPTE-- 836
            .|.|...:||...|.      ::.:::.....:.|.|             |||..:.:|:|..  
 Frog   411 CSVKELKDQLNMMMETIQAKDEVIMRLSRQLSKYEQH-------------TPSSTVAAEIPVAPQ 462

  Fly   837 --------------------------FLSPMRKPAKRGKRDAAELR------ELWRTAIRQTIML 869
                                      .||.:|:.|:|.:|: .|.|      ::.:...:..::|
 Frog   463 LEELNRLQDSLQGYKAQNTFLNKEILELSALRRNAERRERE-MEARYSNLEAKMCQIESKYLVLL 526

  Fly   870 NRMET------------------------ENA---------------------MLQARQNENELK 889
            ..|:|                        |||                     ::....:|.|.|
 Frog   527 QEMKTPVCSDDQGTAREFVNQLLEDALKVENAEQPEHTFVKPHTVSKYDIHGFLIVPEDDEEEEK 591

  Fly   890 RI----KLDYEEIVPCDKQLIE---RWEQIIERN-STQIGNKKDPKVLGHAIRTGVPRSKRGDVW 946
            .:    .||.:.:...:.|.|.   :|:...... :.::....:.|.|   :|.|:|...|..:|
 Frog   592 LVAKVRALDLKTLSLTENQEISNVVKWDNYFASTVNREMACSPELKAL---VRNGIPHEHRSRMW 653

  Fly   947 TFLAEQHSMNTAPVDTKRFPNFNTP--YHMLLKHLTEHQH----AIFIDLGRTFPNHQFYKDPLG 1005
            .:....|        .|:..:...|  :..||::..|.|:    .|.:||.||.||::.|..|..
 Frog   654 KWFTNLH--------IKKLKDEAAPGYFQSLLQNALEKQNPASKQIELDLMRTLPNNKHYTSPTS 710

  Fly  1006 LGQLSLFNLLKAYSILDPELGYCQGLGFICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLPDMKK 1070
            .|...|.|:|.|||..:|::|||||:..:..:.||:.|:.::|..|..::.....|..|...:..
 Frog   711 EGIQKLRNVLLAYSWRNPDIGYCQGINRLAAIALLYLDQEDAFWCLVTIVEAFMPRDYYTKTLLG 775

  Fly  1071 FQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDV 1135
            .|:.......|:.:.||.|....:|..|..||....|.|.||........:.|::|.|..|.|.|
 Frog   776 SQVDQRVFKDLMNEKLPRLCAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFRIWDSLLYEGSKV 840

  Fly  1136 IFKFAIALLSVHKQQLLAKDNFEEIMDYLK 1165
            ||:||:.|....::::|...:...|..||:
 Frog   841 IFRFALGLFKYKEEEILKLQDSMSIFKYLR 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 48/240 (20%)
DUF3350 831..880 CDD:463365 16/127 (13%)
TBC 933..1152 CDD:214540 65/224 (29%)
COG4372 <1190..>1353 CDD:443500
tbc1d2bXP_012822167.2 PH_TBC1D2A 34..134 CDD:269966 18/69 (26%)
Smc 322..>560 CDD:440809 44/306 (14%)
TBC 640..857 CDD:214540 65/224 (29%)
Blue background indicates that the domain is not in the aligned region.

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