DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment plx and evi5

DIOPT Version :9

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_002933848.4 Gene:evi5 / 733501 XenbaseID:XB-GENE-983877 Length:825 Species:Xenopus tropicalis


Alignment Length:695 Identity:163/695 - (23%)
Similarity:285/695 - (41%) Gaps:182/695 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   786 AEQLKSPMMDIFIKVGNSPKEAETHQGSWRQAILNSVVTPSKGLDSEVPTEFLSPMRKPAKRGKR 850
            |.|:.||             .|..|..|....:....::||.      |.| |||          
 Frog     2 ASQVASP-------------SASLHTTSSSTTLSTPALSPSS------PVE-LSP---------- 36

  Fly   851 DAAELRELWRTAIRQTIMLNRMETENAMLQ-----------ARQN--------ENELKRIKLDYE 896
            |..||             |.::|.:|.:|:           :|:|        .:....:....|
 Frog    37 DDVEL-------------LAKLEEQNRLLEIDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHHQE 88

  Fly   897 EIVPCDK-----QLIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMN 956
            |    |.     :::..||::.         ||..|.:...:|.|:|...|..||..|....:| 
 Frog    89 E----DSWLLWGRIVNEWEEVY---------KKKEKQIKELVRKGIPHHFRAIVWQLLCNAQNM- 139

  Fly   957 TAPVDTKRFPNFNTPYHMLLKHLTEHQHAIFIDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSIL 1021
              |:..:        |..|||..:..:..|..|:.||:|.|.|:|:...|||..|||::||||::
 Frog   140 --PIKDQ--------YCDLLKMTSPCEKLIRRDIARTYPEHDFFKEKDSLGQEVLFNVMKAYSLV 194

  Fly  1022 DPELGYCQGLGFICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHL 1086
            |.|:|||||..||.|:||:...|..:|.:...||....:|..:.|.|.:..|.:||...::::.|
 Frog   195 DREVGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEQL 259

  Fly  1087 PDLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQL 1151
            |:|||.........::||:.|.||:|.:.|||....|:||:...|..:::|:..:|:|.:::.:|
 Frog   260 PELYVHFQAQSFHTSMYASSWFLTIFLTSFPLPIATRIFDIFMSEGLEIVFRAGLAVLQMNQTEL 324

  Fly  1152 LAKDNFEEIMDYLKTVVPKMEHTCMEQIMKLVFSMDIGKQLAEYKVEYNV-----LQEEITT-TN 1210
            :..| .|.::.:.:.|:|.......:::::           |.|:|:||.     |::|.|| ..
 Frog   325 MQLD-MEGMLQHFQKVIPHQFDGGPDKLIQ-----------AAYQVKYNAKKMKKLEKEYTTIKT 377

  Fly  1211 HHLE---MLNREKTQNQHLEQQLQFAQSSIAQL-------ETTRSSQ-------QAQITTLQSQV 1258
            ..||   .:.|.:|:|:.|:|:::..:...|.|       :.||:.:       :.::.|::.|.
 Frog   378 KELEEQVEIKRLRTENRLLKQRIETLEKESASLADRLIQGQVTRAQEAEENYLIKRELATIKQQS 442

  Fly  1259 QSLELTIQTLGRYVGQLVEHNPDLEL--PNEVRRMLQQLDDLDRQRRKPIFTERKIGKSVSVNSH 1321
            ......::.....:.:| :|..:|..  |......:.||:           ||....:.....||
 Frog   443 DEASTKLEQAHHTISEL-QHQRELHKCNPRYSEEFVLQLE-----------TELVQARLKEAESH 495

  Fly  1322 LGFPLKVLE----ELTER-----DELGSPQKQK----------------KEKTPFFEQLRQQQQQ 1361
            ..  :|.::    |:.:|     ||:...:.|:                ||.....:.|.:..|:
 Frog   496 CA--MKEMQDKILEIEKRNASLPDEINVVRLQEELIAVKLREAEAVMALKEVKQQIKNLEEHWQR 558

  Fly  1362 HRLNGGGQSSNVGESGSPTPPSRP--NRLLDNASARTVMQVKLDE 1404
            |.....|:..:        ||.:.  |.|.|.     :|.|:|.|
 Frog   559 HLARTAGRWKD--------PPKKNTINELQDE-----LMTVRLRE 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 835..880 CDD:288663 10/44 (23%)
TBC 933..1152 CDD:214540 74/218 (34%)
RILP-like <1176..1267 CDD:304877 22/113 (19%)
evi5XP_002933848.4 TBC 117..325 CDD:214540 74/218 (34%)
Smc <350..694 CDD:224117 53/279 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.