DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and Grtp1

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_001355787.1 Gene:Grtp1 / 66790 MGIID:1914040 Length:359 Species:Mus musculus


Alignment Length:319 Identity:92/319 - (28%)
Similarity:150/319 - (47%) Gaps:45/319 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   895 YEE-----IVPCDKQLIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHS 954
            |||     :|...|:.| :|.::::.|.   |.:|...|..: :|.|:|...|..||.      :
Mouse    33 YEEFFSTYLVILTKRAI-KWSKLLKGNG---GVRKSVTVKRY-VRKGIPLEHRARVWM------A 86

  Fly   955 MNTAPVDTKRFPNFNTPYHMLL--KHLTEHQHAIFIDLGRTFPNHQFYK---DPLGLGQLSLFNL 1014
            ::.|.....:.|.:   ||.||  :..:....||..||.||||::..::   ||  ..|.:|:|:
Mouse    87 VSGAQARMDQSPGY---YHRLLEGESSSSLDEAIRTDLNRTFPDNVMFRKTADP--CLQKTLYNV 146

  Fly  1015 LKAYSILDPELGYCQ-----------------GLGFICGVLLLHC-DEANSFQLLKHLMFRRNMR 1061
            |.||.:.:|::||||                 |:.||.|.|:|.. :|..||.||..|: .|.:.
Mouse   147 LLAYGLHNPDVGYCQCCAQKPGSSAGLRSSLTGMNFIAGYLILITKNEEESFWLLDALV-GRILP 210

  Fly  1062 TKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFD 1126
            ..|.|.|...:.....|:.||:..||.:...:|.:.|..||..:.|.:.:|....|:..|.|::|
Mouse   211 DYYSPAMLGLKTDQEVLAELVRMKLPAVAALMDGHGVLWTLLVSRWFICLFVDILPVETVLRIWD 275

  Fly  1127 LLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVVPKMEHTCMEQIMKLVFS 1185
            .||.|.|.:||:.|:.|:..|::.:|...:..:|.|..|.:......|.....|:.:||
Mouse   276 CLFNEGSKIIFRVALTLIKQHQEFILEASSIPDICDKFKQITKGDFVTECHAFMQKIFS 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540 73/241 (30%)
COG4372 <1190..>1353 CDD:443500
Grtp1NP_001355787.1 TBC 71..301 CDD:214540 73/241 (30%)
Blue background indicates that the domain is not in the aligned region.

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