DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and rabgap1l

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_073792904.1 Gene:rabgap1l / 555272 ZFINID:ZDB-GENE-050208-389 Length:1021 Species:Danio rerio


Alignment Length:1146 Identity:248/1146 - (21%)
Similarity:443/1146 - (38%) Gaps:288/1146 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 SQAKPLVQLQLTGAE--EGAAPRPLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQ 458
            |:.:|.:::...|:|  |.|....|:|..:....|:.   :|.:||           :|.:.::.
Zfish    39 SEGRPRLKMSWNGSEQLERAMEEVLDDVADGAGAEQE---KGCTQI-----------RPPSLDTA 89

  Fly   459 LEAPNVIVNKQPTPPRDQGVG------TGTASASAGPSQLHPNYAMDNIPKQRDRSA-------- 509
            ....:..:.:.||.|.::.|.      .|.....|..|:.....||..:   |..||        
Zfish    90 PHESSAALLESPTVPEEESVQFSKLSYLGCTWVKAPRSETEAQKAMATL---RAESAIPIPVILH 151

  Fly   510 ----SQGCIPPYVEQNRT---------MVFLVGRCDLRLISPDRKQVLLYKDFKDVASCVHGQKS 561
                |.||:....:.:.|         ::|....|:..:.|             |..|.....:|
Zfish   152 VPNGSDGCVRIVDQASGTEIASFPIYKVLFCARGCEGSVES-------------DCFSFTESYRS 203

  Fly   562 LDHFGIICRELNNDGYIGYVFKCQSEHVCDDIVAAIAQAFDTCAEQKKKQDTQIFSCEHCPMLWY 626
            .:.|.|            :||.|   |: .:.|:.|..:|.|..::..|..|::   :..|:   
Zfish   204 SEDFQI------------HVFSC---HI-KEAVSRILYSFSTAFKRSAKAATEM---QDSPL--- 246

  Fly   627 HKLCTDVEGLSEKKTQALILRRIETLSDDEQEIVWAKFCGSEKTN-SPVAEQNQFLMMLLRAHCE 690
             .|..|    |:..|.::.|   |...||            .|.| |||.:........||...:
Zfish   247 -PLSPD----SDVFTFSVSL---EVREDD------------GKGNFSPVPKDRDKYYFKLRQGVQ 291

  Fly   691 SRQQRHVHDTAENRSEFLNQYLGGSTIFMKAKRSLTNSFDNLLKRKPSKDDIAVPSHNLRDIREG 755
            .:....|...  |..|.:.:...|  :.:...:.:.||..:||       |:.....|    .:|
Zfish   292 KKVSVVVQQL--NNKELVIERCFG--MLLSPGQKVRNSDMHLL-------DMESMGKN----ADG 341

  Fly   756 SAEPL-GTQSPPEGFRSRSNTVGASPSSKPTAEQLKSPMMDIFIKVGNSPKEAETHQGSWRQAIL 819
            .|..: |..:|        ||    |:.:|..|              ::||:.:.:.......::
Zfish   342 KAYVITGIWNP--------NT----PAFQPLNE--------------DTPKDKQVYMTVAVDLVV 380

  Fly   820 NSVVTPSKGLDSEV----PTE--------------FLSPMRKPAKRGKRDAAELRELWRTAIRQT 866
            ..||.|.:.|...:    |..              |...:::.:.:|.:|         ..:.:.
Zfish   381 TEVVEPVRFLMEALVRVYPANERFWYFSRKAFCETFYLKLKQGSVKGSQD---------DMMYEV 436

  Fly   867 IMLNRMETENAMLQAR-QNENELKRIKLDYEEIV---------PCDKQLIERWEQIIERNSTQIG 921
            :.|.:.....:..:.| |:..|.:..:.|.:..:         .|.::::|.|..|:.|....:.
Zfish   437 VSLEKHSECGSQARGRLQSPTEEEEPEEDSDSEISSGTGDVSKDCPEKILESWGGILNRWQGNLL 501

  Fly   922 NKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKRFPNFNTPYHMLLKHLTEHQHAI 986
            .:  ||.|...::.|:|.:.|.:||..|:..|: :.|.::         .|.:|:...:..:..|
Zfish   502 TR--PKGLSALVKPGIPEALRAEVWQLLSGCHN-DQALLE---------QYRILITKESAQEAVI 554

  Fly   987 FIDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLGFICGVLLLHCDEANSFQLL 1051
            ..|:.||||.|.::||..|.||.||:.:.||||:.|.|:|||||..|:..|||||..|..:|.:|
Zfish   555 TRDIHRTFPAHDYFKDSGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFCVL 619

  Fly  1052 KHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQF 1116
            ..:||...:|..|..:.:....:.|||.||:::.||||:....:.::...:||:.|.||:|:::|
Zfish   620 VKIMFNYGLRELYRNNFEDLHCKFYQLERLLQELLPDLWSHFQELNLEAHMYASQWFLTLFTAKF 684

  Fly  1117 PLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVVPK----------- 1170
            ||..|..:.|||..|..::||..|:|||...|:.||..| ||..:.:.:..:||           
Zfish   685 PLCMVFHITDLLLCEGLNIIFNVALALLKTSKEDLLQAD-FEGALKFFRVQLPKRYRAAENARRL 748

  Fly  1171 MEHTCMEQIMKLVFSMDIGKQLAEYKVEYNVLQEEITTTNHHLEMLNREKTQNQHLEQQLQFAQS 1235
            ||..|..::..        |:|.:::.||..|:|........::...||..:.|....:|:....
Zfish   749 MEQACNIKVPT--------KKLKKFEKEYQSLRESQLQQEDPIDRYQRENRRLQEASMRLEQEND 805

  Fly  1236 SIA-QLETTRSSQQAQITTLQSQVQSLELTIQTLGRYVGQLVEHNPDLELPNEVRRMLQQLDDLD 1299
            .:| :|.|::       ..|::.:...|.....|.:            ||.|..:|:::..::..
Zfish   806 DLAHELVTSK-------IALRNDLDQAEDKADVLNK------------ELLNTKQRLVETEEEKR 851

  Fly  1300 RQRR-----KPIF------TERKIGKSVSVNSHLGFPLKVLEELTERDELGSPQKQKKE------ 1347
            ||..     |.:|      .|::|.|:.::.:..   .::..:|:.|  |...|...||      
Zfish   852 RQEEETAQLKEVFRRELEKAEQEIKKTTAIIAEY---KQICSQLSTR--LEKQQASTKEELDIVK 911

  Fly  1348 -KTPFFEQLRQQQQQHRLNGGGQSSNVGESGSP---TPPSRPNRLLDNASARTVMQVKLDELKLP 1408
             |....|:.|:               |.....|   .|.|:.||..|....:..::.:|.||:|.
Zfish   912 AKVMACERCRE---------------VFSKDGPLQIPPVSQDNRDTDLDEEKDSLKAQLRELELE 961

  Fly  1409 EHVDKFVANIKSPL--------EVDSGVGTPLSPPSTASNS 1441
                  :|..|..|        |::...|..::....|.||
Zfish   962 ------LAQTKLQLVEAKCKIQELEHQRGVLMTEVQAAKNS 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 43/233 (18%)
DUF3350 831..880 CDD:463365 5/66 (8%)
TBC 933..1152 CDD:214540 78/218 (36%)
COG4372 <1190..>1353 CDD:443500 34/181 (19%)
rabgap1lXP_073792904.1 None

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