DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and TBC1D2

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_001254500.1 Gene:TBC1D2 / 55357 HGNCID:18026 Length:928 Species:Homo sapiens


Alignment Length:949 Identity:193/949 - (20%)
Similarity:341/949 - (35%) Gaps:277/949 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 GGVGIEA--KPSSSLKSHDLKEEDEEEQEQHKGHDDSQDSQAKPLVQLQLTGAEEGAAPRPLEDN 421
            |.||:.|  :|..:|::..||....|  .|:..|:...:.||      |.||.|.     |.||:
Human   189 GLVGVAAALQPFPALQNISLKHLGTE--IQNTMHNIRGNKQA------QGTGHEP-----PGEDS 240

  Fly   422 KENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQLEAPNVIVNKQPTPPRDQGVGTGTASAS 486
            .::..|::.                   .||||  |....|.......|.|.....:....|..:
Human   241 PQSGEPQRE-------------------EQPLA--SDASTPGREPEDSPKPAPKPSLTISFAQKA 284

  Fly   487 AGPSQLHPNYAMDNIPKQRDRSASQGCIPPYVEQNRTMVFLVGRCDLRLISPDRKQVLLYKDFKD 551
            ...:...|.:             |:|     :.:|||....|...:        :|||:      
Human   285 KRQNNTFPFF-------------SEG-----ITRNRTAQEKVAALE--------QQVLM------ 317

  Fly   552 VASCVHGQKSLDHFGIICRELNNDGYIGYVFKCQSEHVCDDIVAAIAQAFDTCAEQKKKQDTQIF 616
                            :.:||          |.|.|     :|..:.:|.:...::|:.....:.
Human   318 ----------------LTKEL----------KSQKE-----LVKILHKALEAAQQEKRASSAYLA 351

  Fly   617 SCEHCPMLWYHKLCTDVEGLSEKKTQ-ALILRRIETLSDDEQEIVWAKFCGSEKTNSPVAEQNQF 680
            :.|....|         |.:..|..| |.:.||:|.|..:.:.:                     
Human   352 AAEDKDRL---------ELVRHKVRQIAELGRRVEALEQERESL--------------------- 386

  Fly   681 LMMLLRAHCESRQQRHVHDTAENRSEFLNQYLGGSTIFMKAKRSLTNSFDNLLKRKPSKDDIAVP 745
                  ||..|.:::.|.:..::....:::......:..|....:|..|.:...:.|.:.|.|  
Human   387 ------AHTASLREQQVQELQQHVQLLMDKNHAKQQVICKLSEKVTQDFTHPPDQSPLRPDAA-- 443

  Fly   746 SHNLRDI--REGSAEPLGTQSPPEGFRSRSNTVGASPSSKPTAEQLKSPMMDIFIKVGNSPKEAE 808
               .||.  ::|..|.|  :...|.:|::                             |....:|
Human   444 ---NRDFLSQQGKIEHL--KDDMEAYRTQ-----------------------------NCFLNSE 474

  Fly   809 THQGS--WRQAILNSVVTPSKGL----------DSEVPTEFLSPMRKPAKRGKRDAAELRELWRT 861
            .||.:  ||:     |....|.|          :.:|.:::|:.:|:..:....:|:|..||.|.
Human   475 IHQVTKIWRK-----VAEKEKALLTKCAYLQARNCQVESKYLAGLRRLQEALGDEASECSELLRQ 534

  Fly   862 AIRQTIMLNRMETENAMLQ----ARQNENELKRIKLDYE-----------------------EIV 899
            .:::.:.....|..:..::    ::.:|.....:. |||                       |.|
Human   535 LVQEALQWEAGEASSDSIELSPISKYDEYGFLTVP-DYEVEDLKLLAKIQALESRSHHLLGLEAV 598

  Fly   900 PCDKQLIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKR 964
              |:.|.|||        ..:|:......|...:|.||||..|..||.:|..           .|
Human   599 --DRPLRERW--------AALGDLVPSAELKQLLRAGVPREHRPRVWRWLVH-----------LR 642

  Fly   965 FPNFNTP--YHMLLKHLTEHQH----AIFIDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDP 1023
            ..:.:||  |..||......:|    .|.:||.|||||::.:..|.......|..:|.|:|..:|
Human   643 VQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNP 707

  Fly  1024 ELGYCQGLGFICGVLLLHCDEANS-FQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLP 1087
            .:||||||..:..:.||..:|..| |..|..::........|...:...|:....|..|:.:.||
Human   708 TIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLP 772

  Fly  1088 DLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLL 1152
            .|...|.|:.|..:|....|.|.||:.......:.||:|....|.:.|:|::|:|:...:::::|
Human   773 RLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEIL 837

  Fly  1153 AKDNFEEIMDYLKTVVPKMEHTCMEQIMKLVFSMDIG----KQLAEYKVEYNVLQEEITTTNHHL 1213
            ...|..||..||:.....:.::  .::|.:.|: |:.    |||.:                  |
Human   838 RLQNGLEIYQYLRFFTKTISNS--RKLMNIAFN-DMNPFRMKQLRQ------------------L 881

  Fly  1214 EMLNREKTQNQHLEQQLQFAQSSIAQLETTRSSQQAQIT 1252
            .|::||:     ||.:|:..:...|:....|:|::..::
Human   882 RMVHRER-----LEAELRELEQLKAEYLERRASRRRAVS 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 46/243 (19%)
DUF3350 831..880 CDD:463365 9/48 (19%)
TBC 933..1152 CDD:214540 65/225 (29%)
COG4372 <1190..>1353 CDD:443500 13/63 (21%)
TBC1D2NP_001254500.1 SMC_prok_B <276..480 CDD:274008 50/338 (15%)
Interaction with RAC1. /evidence=ECO:0000269|PubMed:20116244 295..433 34/223 (15%)
TBC 625..837 CDD:214540 64/222 (29%)
Interaction with CADH1 1..169
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
PH_TBC1D2A 47..147 CDD:269966
Atrophin-1 <183..>292 CDD:460830 30/136 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..275 18/81 (22%)
Blue background indicates that the domain is not in the aligned region.

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