DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and Tbc1d8

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_017177250.1 Gene:Tbc1d8 / 54610 MGIID:1927225 Length:1160 Species:Mus musculus


Alignment Length:1004 Identity:187/1004 - (18%)
Similarity:341/1004 - (33%) Gaps:297/1004 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 QKKKQDTQIFSCEHCPMLWYHKLCTDVEGLSEKKTQALILRRIETLSDDEQEIVWAKFCGSE--K 669
            |.|::|...|       |...::...:|.|::...:.|:...:..|..|.||       .|:  |
Mouse   240 QNKERDFSTF-------LNLDEVFKIMEQLADVTLRRLLDNEVFDLDPDLQE-------PSQITK 290

  Fly   670 TNSPVAEQNQFLMMLLRAHCESRQQRHVHDTAE-------NRSEFLNQYLGGSTIFMKAKR---- 723
            .:.....||:|    .||.....::..:|..|:       :|.....:.....:....|.|    
Mouse   291 RDLEARAQNEF----FRAFFRLPREEKLHAVADCSLWTPFSRCHTAGRIFSSDSYICFASREDGC 351

  Fly   724 -SLTNSFDNLLKRKPSKDDIAVPSHNLRDIREGSA----EPLGTQSPPEGFRSRSNTVGASP--- 780
             ::......::..:..:|...:|:..:..||...|    |....::..||...|...|.|:.   
Mouse   352 CNVVLPLREVVSIEKMEDTSLLPNPIIVSIRSKMAFQFIELKDRENLVEGLLLRLKQVHANHPVH 416

  Fly   781 -SSKPTAEQLKSPMMDIFIKVGNSPKEAETHQGSWRQAILNSVVTPSKGLDSEVPTEFLSPMRKP 844
             .:.|:.:.:.||:.                                  ..:.:.|:....:...
Mouse   417 YETSPSDDDMASPVF----------------------------------YSASICTDKFGDLEMV 447

  Fly   845 AKRGKRDAAELRELWRTAIRQTIMLNRMETENAMLQARQNENELKRIKLDYEEIVPCDKQLIERW 909
            |.:...:..|.|.           |...|...|:.|  |:.::....:|..|:|      .|..|
Mouse   448 ASQSSEEREEKRP-----------LPHPEPLTAVFQ--QSGSQSPDSRLSREQI------KISLW 493

  Fly   910 -EQIIE--RNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKRFPNFNTP 971
             :..:|  |.......:|..|:    :..|:|.|.||.:|...::      |..|....|.:   
Mouse   494 NDHFVEYGRTVCMFRTEKIRKL----VAMGIPESLRGRLWLLFSD------AVTDLASHPGY--- 545

  Fly   972 YHMLLKH-------LTEHQHAIFIDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQ 1029
            |..|::.       :||.   |..||.|:.|.|..:::..|:.  :|..:|.||:..:|::||||
Mouse   546 YGNLVEQSLGRCCLVTEE---IERDLHRSLPEHPAFQNETGIA--ALRRVLTAYAHRNPKIGYCQ 605

  Fly  1030 GLGFICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLPDMKKFQL---QLYQ--LSRLVKDHLPDL 1089
            .:..:..||||:..|..:|.||..:..|      .|||....::   |:.|  ...|:|:.||:|
Mouse   606 SMNILTSVLLLYAKEEEAFWLLVAVCER------MLPDYFNHRVIGAQVDQSVFEELIKEQLPEL 664

  Fly  1090 YVWLDQNDVSP-TLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLL- 1152
            ...:  :|:|. ...:..|.||:|.|..||.....|.|..|.:....||:..:|:|..:.::|. 
Mouse   665 AEHM--SDLSALASISLSWFLTLFLSIMPLESAVHVVDCFFYDGIKAIFQLGLAVLEANAEELCS 727

  Fly  1153 AKDNFEEIM------DYLKT----------------------------------------VVP-- 1169
            :||:.:.:|      |::|.                                        .||  
Mouse   728 SKDDGQALMVLSRFLDHIKNEDSPGPPIGSHHAFFSDDQEPYPVTDIADLIRDSYELWTQAVPVS 792

  Fly  1170 ----------KMEH-TCMEQIMKLVFSMDIGKQ--LAEYKVEYNVLQEEITTT------------ 1209
                      ::|| .|..:|..|....|..||  |.....|.::|.|::...            
Mouse   793 MQKFGNQSVEQIEHLRCKHRIRVLQGHEDTTKQNVLRVVIPEVSILPEDLEELYDLFKRAHMMSC 857

  Fly  1210 --NHHLEMLNREKTQNQHLEQQLQFAQSSIAQLETTRSSQQAQITTLQSQVQSLELTIQTLGRY- 1271
              .||..|..|......:.||.         :::..:.:...|:.:..:.....|:..:.|.|. 
Mouse   858 YWEHHRPMALRHDPSRPYAEQY---------RIDARQFAHLFQLVSPWTCGVHTEILAERLFRLL 913

  Fly  1272 ---VGQLVE-----------HNPDLELPNEVRRMLQQL--------DDLDRQ---------RRKP 1305
               :.||:|           :|.::   ||..::|.:|        :|.|.|         ..:|
Mouse   914 DDNMDQLIEFKAFTSCLDIMYNGEM---NEKIKLLYRLHIPPALTENDRDSQSPLKNPLLSTSRP 975

  Fly  1306 IFTERKIGKSVSVNSHLGFPLKVLEELTERDELGSPQKQKKEKTPF----FEQLRQQQQQHRL-- 1364
            :...:..|.::.....|...:|.|.:..::.|...|:..::|...|    :....:..:::.|  
Mouse   976 LVLGKPNGDTIDYQKQLKQMIKDLAKEKDKMEKELPKMSQREFIQFCKTLYSMFHEDPEENDLYQ 1040

  Fly  1365 --------------------NGGGQSSNVGESGSPTPPSRPNRLLD---------------NASA 1394
                                :.|..|....|..:..||.:.:...:               ..|.
Mouse  1041 AIATVTTLLLQIGEVGQRGSSSGSCSQECEEPQASAPPEQDSVFAEAGKSPQAFPETEGDWTVSL 1105

  Fly  1395 RTVMQVKLDELKLPEHVDKFVANIKSPLE 1423
            ..::...|.|..|....:| ..||||.||
Mouse  1106 EHILASLLTEQSLVNFFEK-PLNIKSKLE 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365 7/48 (15%)
TBC 933..1152 CDD:214540 64/231 (28%)
COG4372 <1190..>1353 CDD:443500 36/214 (17%)
Tbc1d8XP_017177250.1 PH-GRAM1_TBC1D8 171..269 CDD:270156 7/35 (20%)
PH-GRAM2_TBC1D8 311..406 CDD:270160 13/94 (14%)
TBC 519..725 CDD:214540 64/227 (28%)
Blue background indicates that the domain is not in the aligned region.

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