DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and grtp1

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_001005632.1 Gene:grtp1 / 448089 XenbaseID:XB-GENE-950226 Length:342 Species:Xenopus tropicalis


Alignment Length:346 Identity:94/346 - (27%)
Similarity:155/346 - (44%) Gaps:54/346 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   895 YEEIVPCDKQLIER----WEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLA---EQ 952
            |||.:.....::.|    |.:::::::..   :|:.||..: ||.|:|...|..||..::   .|
 Frog    31 YEEFIARYHVVLTRRAIKWSKLLQQSAAV---EKNMKVKRY-IRKGIPNEHRSHVWMVVSGAQAQ 91

  Fly   953 HSMNTAPVDTKRFPNFNTPYHMLLKHLTEHQ------HAIFIDLGRTFP-NHQFYKDPLGLGQLS 1010
            ..|||.               ...:..||.:      ..:..||.|||| |..|.|:.....|..
 Frog    92 MDMNTG---------------YFRRMFTEGEKNPKLLDLVITDLNRTFPDNVLFQKNANPSLQKD 141

  Fly  1011 LFNLLKAYSILDPELGYCQGLGFICGVLLLHC-DEANSFQLLKHLMFRRNMRTKYLPDMKKFQLQ 1074
            |:|:|.||...:..:|||||:.||.|.|:|.. ||..:|.|:..|: .:.:...|.|.|...:..
 Frog   142 LYNVLVAYGQHNKTVGYCQGMNFIAGYLILVTKDEEKAFWLMDALI-GQILPDYYSPAMTGLKTD 205

  Fly  1075 LYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKF 1139
            ...|..|||..:|.:...::.:.|..||..:.|.:.:|....|:..|.|::|.||.|.|.|||:.
 Frog   206 QEVLGDLVKKKIPSVAQLIETHGVMWTLLVSRWFICLFIDILPVETVLRIWDCLFFEGSKVIFRV 270

  Fly  1140 AIALLSVHKQQLLAKDNFEEIMDYLKTVVPKME-----HTCMEQIMKLVFSMDIGKQLAEYKVEY 1199
            |:.|:...:..::...||.:|.|..|.:. |.|     |..|::|.....|:.        |...
 Frog   271 ALTLIKQSQASIMEARNFPDICDKFKEIT-KGEFVTDCHYFMQKIFAEPGSLS--------KTTI 326

  Fly  1200 NVLQEEITTTNHHLEMLNREK 1220
            :.|:|:     ..|::::.||
 Frog   327 DKLREK-----QRLKLISEEK 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540 69/229 (30%)
COG4372 <1190..>1353 CDD:443500 6/31 (19%)
grtp1NP_001005632.1 TBC 69..283 CDD:214540 69/229 (30%)
Blue background indicates that the domain is not in the aligned region.

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