DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and TBC1D5

DIOPT Version :9

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_731780.1 Gene:TBC1D5 / 41628 FlyBaseID:FBgn0038129 Length:654 Species:Drosophila melanogaster


Alignment Length:675 Identity:129/675 - (19%)
Similarity:237/675 - (35%) Gaps:221/675 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   907 ERWEQIIERNSTQIGNKKDPKVLGHAIRTG-VPRSK-RGDVWTFL-----AEQHSMNTAPVDTK- 963
            :.|:.::|....      ||:.|..:...| :..|| |...|..|     :|..|..:..:..: 
  Fly    46 QEWQVLLENLDA------DPESLRQSAFAGDLKMSKFRSVHWALLLRVLTSEHRSWTSQRLQQRV 104

  Fly   964 RFPNFNTPY----HML--------LKHLTE---HQH--------AIFIDLGRTFPNHQFYKDPLG 1005
            |:..|...|    |.|        |...|:   :|:        .|..|:.||||...|::.|  
  Fly   105 RYDKFRADYVRNPHQLAVDCNDDPLSQSTQSVWNQYFSDQDLFAVIRQDVVRTFPGVDFFRKP-- 167

  Fly  1006 LGQLSLFNLLKAYSILDPELGYCQGLGFICGVL----------LLHCD----------------- 1043
            |.|.::.|:|..|:...|.:.|.||:..|...:          |||..                 
  Fly   168 LVQNAMVNILFYYAREHPYMCYRQGMHEILAPIIFVVYSDHQSLLHFSELAKTDINPTLLDVLDP 232

  Fly  1044 ---EANSFQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVK---DHLPD-------------- 1088
               ||:::.|...||          ..::.:    |::|.||.   .|:..              
  Fly   233 AYLEADTYSLFSRLM----------ASVESY----YRVSNLVSTPGGHIEQRAESPGDNETSTEA 283

  Fly  1089 --------------------LYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESS 1133
                                |:.:|.:.::...::...|:..:|..:|.|..:..::|.:|.:|.
  Fly   284 EVIGQLNFIRDKILAKQDQHLHHYLQKMEIPLHIFGIRWLRLLFGREFMLLDLLLLWDAIFADSD 348

  Fly  1134 --DVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVVPKMEHTCMEQIMKLVFSMDIGKQLAEYK 1196
              |:.....:|:|...:.:||       :.||.         |.:..:|:...::|:        
  Fly   349 RFDLPNYILVAMLVHIRDKLL-------LSDYT---------TSLTYLMRYPNNVDV-------- 389

  Fly  1197 VEYNVLQEEITTTNHHLEMLNREKTQ-NQHLEQQLQFAQSSI------------------AQLET 1242
              :.||:       |.|.|||.::.: ..:....:.||.||.                  :.:.|
  Fly   390 --HLVLR-------HALFMLNPKQFEYPPNAFTCVSFANSSADKDVPPPAGQRPRTNSENSSMAT 445

  Fly  1243 TRSSQQAQITTLQ-------SQVQSLELTIQTLGRYVGQLVEHNPD---LELPNEVRRMLQQLDD 1297
            :.|....|||.:|       |.:..|:.|.:..   :...:|::|:   |||.|     .|.:..
  Fly   446 SGSQIDRQITFMQERNAADSSALAKLQDTHRVA---MDGYLENSPELLRLELKN-----AQTVIK 502

  Fly  1298 LDRQRRKPIFT--ERKIGKSVSVNSHLGFPLKVLEELTERDELGSPQKQKKEKTPFFEQLRQQQQ 1360
            :.|.:.:...:  ...:||..:.:..||..|..:|||....::.......:...|..:.|...:|
  Fly   503 IARSKLQSYLSTVRHHVGKQANGSEELGRTLDGIEELCSFLDVKFMFPLHQRSAPIDQALEANEQ 567

  Fly  1361 QHRLNGGGQSSNVGESGSPTPPSRP------------NRLLDNASARTVMQVKLDELKLPEHVDK 1413
            :       |.:.|.:...||..|.|            .::.:||...:.|:..|.||:..|    
  Fly   568 K-------QLNTVSKPPKPTASSTPANAPAALSATGGYQMPENAFMHSSMRRLLGELREIE---- 621

  Fly  1414 FVANIKSPLEVDSGV---GTPLSPP 1435
             ::.|.|..:..:.|   |.|.:.|
  Fly   622 -LSTITSDEKPGNAVVQNGLPAAEP 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 835..880 CDD:288663
TBC 933..1152 CDD:214540 59/318 (19%)
RILP-like <1176..1267 CDD:304877 22/116 (19%)
TBC1D5NP_731780.1 TBC <150..369 CDD:214540 43/234 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456529
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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