DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and grtp1a

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_998567.1 Gene:grtp1a / 406711 ZFINID:ZDB-GENE-040426-2733 Length:356 Species:Danio rerio


Alignment Length:327 Identity:92/327 - (28%)
Similarity:147/327 - (44%) Gaps:45/327 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   881 ARQNENEL------KRIKLDYEEIVPCDKQLIE-----------RWEQIIERNSTQIGNKKDPKV 928
            ||:..|.:      :....|||    ..:||:.           ||.::::.......|.|    
Zfish    23 ARERANSVDAYGFQRSDDFDYE----THEQLMSEYLAVLTRRSIRWAKLLQGRRRVDRNLK---- 79

  Fly   929 LGHAIRTGVPRSKRGDVWTFLA-EQHSMNTAPVDTKRFPNFNTPYHMLL--KHLTEHQHAIFIDL 990
            :...:|.|||...|..||...: .|..|:       |.|.:   |..||  .|..:.:.:|..||
Zfish    80 VKRYVRKGVPNEHRPLVWMVCSGAQEQMD-------RNPGY---YQSLLDTHHEPKLEESIRTDL 134

  Fly   991 GRTFP-NHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLGFICGVLLL-HCDEANSFQLLKH 1053
            .|||| |..|.|......|.:|:|:|.||...:..:|||||:.||.|.|:| ..||..||.|::.
Zfish   135 HRTFPDNIYFRKSAEPCLQQALYNVLVAYGHHNKAVGYCQGMNFIAGYLILVSKDEETSFWLMEA 199

  Fly  1054 LMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFPL 1118
            |: .|.:...|.|.|...:.....|..||:...|.::..:....|..||..:.|.:.:|....|:
Zfish   200 LL-SRILPDYYTPAMLGLKTDQEVLGELVRLKAPAVWKLMQDQGVMWTLVVSRWFICLFIDVLPV 263

  Fly  1119 GFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVV--PKME--HTCMEQI 1179
            ..|.|::|.||.|.|.::|:.|:.|:..|:|::....|..::.:..|.:.  ..:|  ||.|::|
Zfish   264 ETVLRIWDCLFYEGSKILFRVALTLIRHHQQEIAEAQNLPDVCERFKRITRGAFVEDCHTFMQKI 328

  Fly  1180 MK 1181
            .:
Zfish   329 FQ 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540 73/223 (33%)
COG4372 <1190..>1353 CDD:443500
grtp1aNP_998567.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 2/5 (40%)
TBC 84..296 CDD:214540 73/222 (33%)
Blue background indicates that the domain is not in the aligned region.

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