DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment plx and Tbc1d2

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_006538109.1 Gene:Tbc1d2 / 381605 MGIID:2652885 Length:923 Species:Mus musculus


Alignment Length:889 Identity:177/889 - (19%)
Similarity:310/889 - (34%) Gaps:261/889 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 VQLQLTGAEEGAAPRPLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQLEAPNVIV 466
            :.|:..|.|.......:..||:.::....||:....|    ..|...|.||     .:..|::..
Mouse   209 ISLKHLGTEIQNTMHNIRGNKQAQAAAHGPLVEDSPQ----GGEPQSGEQP-----SISDPSLPA 264

  Fly   467 NKQPTPPRDQGVGTGTASASAGPSQLHPNYAMDNIP-----KQRDRSASQGCIPPYVEQNRTMVF 526
            .|:   |.|.......:|..:||:| .|....:..|     ..|.|:|.:               
Mouse   265 EKE---PEDPAKSAPRSSVPSGPTQ-KPKRQSNTFPFFSDGLARSRTAQE--------------- 310

  Fly   527 LVGRCDLRLISPDRKQVLLYKDFKDVASCVHGQKSLDHFGIICRELNNDGYIGYVFKCQSEHVCD 591
                   ::.:.:::.::|.|:.|       .||                               
Mouse   311 -------KVAALEQQVLMLTKELK-------SQK------------------------------- 330

  Fly   592 DIVAAIAQAFDTCAEQKKKQDTQIFSCEHCPMLWYHKLCTDVEGLSEKKTQALILRRIETLSDDE 656
            ::|..:.:|.:...::|:.....:.:.|                                 ..|.
Mouse   331 ELVIILHKALEAAQQEKRASSAYLAATE---------------------------------DRDR 362

  Fly   657 QEIVWAKFCGSEKTNSPVAEQNQFLMMLLRAHCESRQQRHVHDTA--ENRSEFLNQYL------- 712
            .|:|..|.       ..:||.||.:..|     |..::|..|:..  |.:.:.|.|::       
Mouse   363 LELVRHKV-------RQIAELNQRVEAL-----EQGRERLAHEAGLREQQVQALQQHVQLLMDKN 415

  Fly   713 -GGSTIFMKAKRSLTNSFDNLLKRKPSKDDIAVPSHNLRDIREGSAEPLGTQSPPEGFRSRSNTV 776
             ....:..|..:.||             :|:|.|:                          ..|.
Mouse   416 HAKQQVICKLTQKLT-------------EDLAQPA--------------------------DATN 441

  Fly   777 GASPSSKPTAEQLKSPMMDIFIKVGNSPKEAETHQGS--WRQAILNSVVTPSKGL---------- 829
            |...|.:...|.||..|.  ..:..|....:|.||.:  ||:     |....|.|          
Mouse   442 GDFLSQQERMEHLKDDME--AYRTQNRFLNSEIHQVTKIWRK-----VAEKEKALLTKCAYLQAR 499

  Fly   830 DSEVPTEFLSPMRKPAKRGKRDAAELREL----------WRTAIRQTIMLNRM------------ 872
            :.:|.:::|:.:|:..:....:|.:..||          |......::.|:.:            
Mouse   500 NCQVESKYLAGLRRLQEAAGAEAGDFPELLQQLIQEALQWEAGEADSVGLSPVSEYDDYGFLTVP 564

  Fly   873 --ETENAMLQARQNENELKRIKLDYEEIVPCDKQLIERWEQIIERNSTQIGNKKDPKVLGHAIRT 935
              |.|:..|.|:....|::...|...|.|  ::.|.:||..:     |::....:.|.|   :|.
Mouse   565 DYEMEDLKLLAKIQALEVRSHHLLAHEAV--ERPLRDRWATL-----TELTPSAELKQL---LRA 619

  Fly   936 GVPRSKRGDVWTFLAEQHSMNTAPVDTKRFPNFNTP--YHMLLK--HLTEHQHA--IFIDLGRTF 994
            ||||..|..||.:|..           :|..:...|  |..||.  ...||..|  |.:||.|||
Mouse   620 GVPREHRPRVWRWLVH-----------RRVRHLQAPGCYQELLARGRACEHPAARQIELDLNRTF 673

  Fly   995 PNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLGFICGVLLLHC-DEANSFQLLKHLMFRR 1058
            |.::.:..|.......|..:|.|:|..:|.:||||||..:..:.||.. ||.::|..|..::...
Mouse   674 PTNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEDEESAFWCLVAIVETI 738

  Fly  1059 NMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVAR 1123
            .....|...:...|:....|..|:.:.||.|...|.|:.|..:|....|.|.||:.......:.|
Mouse   739 LPAEYYSKTLTASQVDQRVLQDLLSEKLPRLTAHLGQHRVDLSLITFNWFLVVFADSLISDILLR 803

  Fly  1124 VFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYL----KTVVPKMEHTCMEQIMKLVF 1184
            |:|....|.:.|:|::|:|:...:::.:|...:..||..||    ||:...      .::|.:.|
Mouse   804 VWDAFLYEGTKVVFRYALAIFKYNEEAILQLQDSLEIYQYLRFFTKTICDS------RKLMSIAF 862

  Fly  1185 SMDIG----KQLAEYKVEYNVLQEEITTTNHHLEMLNREKTQNQ 1224
            : |:.    |||.:.:..:   :|.:......||:|..|..|.:
Mouse   863 N-DMNPFPMKQLRQLRAAH---RERLEAELRELELLKVEYLQRR 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 31/203 (15%)
DUF3350 831..880 CDD:463365 10/72 (14%)
TBC 933..1152 CDD:214540 65/225 (29%)
COG4372 <1190..>1353 CDD:443500 9/35 (26%)
Tbc1d2XP_006538109.1 PH_TBC1D2A 45..146 CDD:269966
PRK12323 <192..404 CDD:481241 47/312 (15%)
COG4913 <307..>464 CDD:443941 38/302 (13%)
TBC 620..832 CDD:214540 64/222 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.