DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and TBC1D16

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_609403.2 Gene:TBC1D16 / 34431 FlyBaseID:FBgn0032249 Length:702 Species:Drosophila melanogaster


Alignment Length:752 Identity:142/752 - (18%)
Similarity:255/752 - (33%) Gaps:237/752 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 FLVGRCDLRLISPDRKQVLLYKD----FKDVASCVHGQKSLDHFGIICRE----LNNDGYIGYVF 582
            |::|  |.||   |||..:.|:|    |.....|:|..       .|.|:    |:|.||:    
  Fly    13 FILG--DERL---DRKIDIAYEDNEILFCKNNVCIHPP-------TIARDESDILHNPGYL---- 61

  Fly   583 KCQSEHVCDDIVAAIAQAFDTCAEQKKKQDTQIFSCEHCPMLWYHKLCTDVEGLSEKKTQALILR 647
                                ||..:                       |.|:..:..|...|:|.
  Fly    62 --------------------TCTTK-----------------------TFVDQYNSAKRPTLLLT 83

  Fly   648 RIETLSDDEQEIVWAKFCGSE---KTNSPVAEQNQFLMMLLRAHCESRQQRHVHDTAENRSEFLN 709
            .|...|..:...:.|..|..:   ::.|| ..:|.:..:.:....:.|..|...:.|.:..|..|
  Fly    84 WIPNSSLCKYTNLNADDCRGQCNPRSKSP-DSRNGYCHVTIPQTIQERDIREEDENAADMQELKN 147

  Fly   710 Q---YLGGS-------TIFMK----------------AKRSLTNSFDNLLKRKPSKDDIAVPSHN 748
            :   .|||.       |..:|                ...:::.|| |.:..:|.       |:|
  Fly   148 ELQPLLGGQAASIDDLTALLKNNPITSVNITISNPQIENSNISQSF-NCITIRPD-------SNN 204

  Fly   749 LRDIREGSAEPLG--TQSP----PEGFRSRSNTVGASPSSKPTAEQLKSPM-------------- 793
            ..|...||....|  |.:|    ||....:.|.......:...|::.||.|              
  Fly   205 CSDCTNGSGVGDGPATDNPKWTTPELLAFKHNLEFPDSGNSTPADRQKSAMKCRHFSVDLSQMRS 269

  Fly   794 MDIFIKVGN--------SPKEAE-----THQG----------SWRQAILNSVVTPSKGLDSEVPT 835
            :.:|....|        :.:|::     .|.|          .|...:.|  :|...|.|     
  Fly   270 LRLFFNDDNCTSGQLVIASRESQYKILHFHYGGLDHLAQVLHQWHCFLHN--ITSETGQD----- 327

  Fly   836 EFLSPMRKPAKRGKRDAAELRELWRTAIRQTIMLNRMETENAMLQARQNENELKRIKLD--YEEI 898
            :|..|.|.                       .|:.|.|.:.:  :...:|.::|:|..:  |..:
  Fly   328 KFDLPYRH-----------------------FMVCRPEVKKS--EMHPDEGDVKKITTNFFYGTL 367

  Fly   899 VPCDKQLIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNT------ 957
            :. :|..||  :.::.|.....|              |:.:|.|..||.||.:.:|.::      
  Fly   368 LN-EKGQIE--DDLLLRKCVFFG--------------GLEKSLRKTVWPFLLKCYSFSSTFEDRA 415

  Fly   958 APVDTKRFPNFNTPYHMLLKHLTEHQHAIF---------IDLGRTFPNHQFYKDPLGLGQLSLFN 1013
            ..:|.|| ..:.......|..::..|...|         .|:.||...:.|:..........:.|
  Fly   416 VLMDIKR-QEYEEITRKRLYSMSPEQQIHFWKTVQIVVEKDVVRTDRTNPFFCGDDNPNTEVMKN 479

  Fly  1014 LLKAYSILDPELGYCQGLGFICGVLLLHCD---EANSFQLLKHLMFRRNMRTKYL--PDMKKFQL 1073
            :|..:::.:..:.|.||:..:...:|  |:   |:.:|.....||    .|..::  |..:....
  Fly   480 ILLNFAVYNTGMSYSQGMSDLLAPVL--CEVQNESETFWCFVGLM----QRAFFVCTPTDRDVDH 538

  Fly  1074 QLYQLSRLVKDHLPDLYVWLDQ-NDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLE-SSDVI 1136
            .|..|..|::..||..|..|:| ||....|:...|:|..|..:|....|.|:::..:.. .:|..
  Fly   539 NLSYLRELIRIMLPHFYKHLEQHNDSMELLFCHRWLLLCFKREFTEAVVIRMWEACWSNYLTDYF 603

  Fly  1137 FKF-AIALLSVHKQQLLAKD--------NFEEIMDYL 1164
            ..| .:|:::|:...::|::        :|..:..|:
  Fly   604 HLFLCLAIIAVYADDVVAQNLRPDEMLLHFSSLAMYM 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 19/82 (23%)
DUF3350 831..880 CDD:463365 6/48 (13%)
TBC 933..1152 CDD:214540 52/241 (22%)
COG4372 <1190..>1353 CDD:443500
TBC1D16NP_609403.2 TBC 387..618 CDD:214540 53/251 (21%)
Blue background indicates that the domain is not in the aligned region.

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