DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and CG4041

DIOPT Version :9

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_572197.4 Gene:CG4041 / 31422 FlyBaseID:FBgn0029736 Length:819 Species:Drosophila melanogaster


Alignment Length:731 Identity:149/731 - (20%)
Similarity:245/731 - (33%) Gaps:204/731 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   643 ALILRRIETLSDDEQEIVWAKFCGSEKTNSPVA--EQNQFLMMLLRAHCESRQQRHVHDTAENRS 705
            :|.|..:|.:...|   :|.|...|......:|  :.|..|..:.|.|       ..|:......
  Fly   179 SLALVMVELILQIE---LWPKLKLSNVVRKILAFGKSNGALEKIAREH-------QCHERYVQMD 233

  Fly   706 EFLNQYLGGSTIFMKAKRSLTNSFDNLLKRKPSKDDIAVPSHNLRDIREGSAEPLGTQSPPEGFR 770
            :.|.|.|......:..:|.|...    |...|..:::      |.|:::...:||          
  Fly   234 QRLRQLLESCLSVLPKRRPLPGE----LLEHPIFEEV------LLDLKKQKMQPL---------- 278

  Fly   771 SRSNTVGASPSSKPTAEQLKSPMMDIF----IKVGNSPKE------------------------A 807
                    ||.::.....|:.|:..|:    :..|:...|                        |
  Fly   279 --------SPETEHLPLLLRCPLSQIYHLWQLAGGDVQAELKKEGLIRSEAPILGLPQIVRLSGA 335

  Fly   808 ETHQGSWRQAILNSVVTPSK---------GLDSEVPTEFLSPMRKPAKRGKRDAAELRELWRTAI 863
            ....|..:..:::..|.|.:         ||.:.|....|...|.||    ..|.||:||     
  Fly   336 SVCPGRSQAQLMDDRVVPLRLKALLQRLSGLPAAVYFPLLHSPRFPA----HFARELQEL----- 391

  Fly   864 RQTIMLNRMETENAMLQARQNENELKRIKLDYEEIVPCDKQLIERWEQIIERNSTQIGNKKDPKV 928
                        ..:::.:..|.:.:|::|        ..:|::.:....|:             
  Fly   392 ------------PLVIREKDIEYQFQRVRL--------FARLLQGYPHTAEQ------------- 423

  Fly   929 LGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKRFPNFNTPYHMLLKHL-TEHQHAIFIDLGR 992
            |.......||...||.:|..|.|     ..|         |..|..:.|.. |.....|.:|:.|
  Fly   424 LQREAAVDVPPLLRGPIWAALLE-----VVP---------NGSYAKIDKFTSTSTDRQIEVDIPR 474

  Fly   993 TFPNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLGFICGVLL---LHCDEANSFQLLKHL 1054
            .....:....|  .|...|..||||:....|:..|.|||..:....|   .:.:|.....|.|.:
  Fly   475 CHQYDELLSSP--DGHRKLRRLLKAWVTAHPQYVYWQGLDSLTAPFLYLNFNNEELAFLSLFKFI 537

  Fly  1055 MFRRNMRTKYLPD----MKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQ 1115
              .:.::..:|.|    :|::   |.:.|:|...|.|.|...|......|.|:|.||.||:||..
  Fly   538 --PKYLQWFFLKDNSAVIKEY---LSKFSQLTAFHEPLLAQHLASISFIPELFAIPWFLTMFSHV 597

  Fly  1116 FPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVVPKMEHTCMEQIM 1180
            |||..:..::|.|.|..|.......||:|...:..||. ..|.|               |:    
  Fly   598 FPLHKILHLWDKLMLGDSSYPLFIGIAILRQLRSTLLT-SGFNE---------------CI---- 642

  Fly  1181 KLVFS------MDIGKQLAEYKVEYNVLQEEITTTNHHLEM-------LNREKTQNQHLEQQLQF 1232
             |:||      || |..|...|: |....:.||...|.|.:       :.....:.:||:|: |.
  Fly   643 -LLFSDLPDIVMD-GCVLESQKM-YEATPKSITHRQHALRLQPPQALDIGVADVELKHLQQE-QC 703

  Fly  1233 AQSSIAQLETTRSSQQAQITTLQSQVQSLELTIQTLGRYVGQLVEHNP-DLELP------NEVRR 1290
            .:.|...::....:..|::..:..:      ::...||.      |.| .:.:|      .|.|.
  Fly   704 PRISAKDVQFLLDNSPAELALIDLR------SVVEFGRV------HVPHSINIPFATVQLGEQRL 756

  Fly  1291 MLQQLDDLDRQRRKPI 1306
            ...|:..|:.|.|..|
  Fly   757 EALQVPQLEAQLRGKI 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 835..880 CDD:288663 9/44 (20%)
TBC 933..1152 CDD:214540 60/226 (27%)
RILP-like <1176..1267 CDD:304877 19/103 (18%)
CG4041NP_572197.4 PKc_like 45..272 CDD:304357 22/112 (20%)
TBC 432..634 CDD:214540 60/222 (27%)
RHOD_Kc 706..810 CDD:238783 14/79 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456514
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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