DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and RABGAP1

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_036329.3 Gene:RABGAP1 / 23637 HGNCID:17155 Length:1069 Species:Homo sapiens


Alignment Length:1200 Identity:275/1200 - (22%)
Similarity:488/1200 - (40%) Gaps:251/1200 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 SSEGGVGIEAKPSSSLKSHD---LKEEDEEEQEQHKGHDDSQDSQAKPLV------QLQLTGAEE 411
            :|.|.:.:.:...|:|.|.|   :..:.:|....:.|.||  :.....:|      |||...|:.
Human     5 ASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDD--EKTGLKIVGNGSEQQLQKELADV 67

  Fly   412 GAAPRPLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQLEAPNVIVNKQPTP---- 472
            ...| |::|....|...||..|.|            :|..||  ::||.|.:.|   .|.|    
Human    68 LMDP-PMDDQPGEKELVKRSQLDG------------EGDGPL--SNQLSASSTI---NPVPLVGL 114

  Fly   473 -------PRDQGVGTGTASASAGP---------SQL-HPNYAMDNIPKQRDRSASQGCIPPYVEQ 520
                   |...|.|...||:...|         |:| :...|..|.|:..            ||.
Human   115 QKPEMSLPVKPGQGDSEASSPFTPVADEDSVVFSKLTYLGCASVNAPRSE------------VEA 167

  Fly   521 NRTMVFLVGRCDL----------------RLISPD-RKQVLLYKDFKDVASCVHGQKSL---DHF 565
            .|.|..|..:|.:                ||:.|. ..::..|..:| :..||.|....   |.|
Human   168 LRMMSILRSQCQISLDVTLSVPNVSEGIVRLLDPQTNTEIANYPIYK-ILFCVRGHDGTPESDCF 231

  Fly   566 GIICRELNNDGYIGYVFKCQSEHVCDDIVAAIAQAFDTCAEQ--------KKKQDTQIF----SC 618
            .......|.:.:..:||:|:.:.....|:.:.|.||...|:|        .:..|:.||    |.
Human   232 AFTESHYNAELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATAAPQTPDSDIFTFSVSL 296

  Fly   619 EHCPMLWYHKLCTDVEGL-----SEKKTQALILRRIETLSDDEQEIVWAKFCGSEKTNSPVAEQN 678
            |...        .|.:|.     .:|..|...||:    ..|::.:::.:    :.||..:|.:.
Human   297 EIKE--------DDGKGYFSAVPKDKDRQCFKLRQ----GIDKKIVIYVQ----QTTNKELAIER 345

  Fly   679 QFLMMLLRAHCESRQQRHVHDTAENRSEFLNQYLGGSTIFMKAKRSLTNSFDNLLKRKPSKDDIA 743
            .|.::|...........|:.|.     |.:.:...|.:..:....:..:....::..:..||.:.
Human   346 CFGLLLSPGKDVRNSDMHLLDL-----ESMGKSSDGKSYVITGSWNPKSPHFQVVNEETPKDKVL 405

  Fly   744 VPSHN----LRDIREGSAEPLGTQSPPEGFRSRSNTVGASPSSK---PTAEQLKSPMMDIFIKVG 801
            ..:..    :.:::|           |..|...:.....||:.:   |.::  :|...:.|:|: 
Human   406 FMTTAVDLVITEVQE-----------PVRFLLETKVRVCSPNERLFWPFSK--RSTTENFFLKL- 456

  Fly   802 NSPKEAETHQGSWRQAILNSVVTPSKGLDSEVPTEFLSPMRKPAKRGKRDAAELRELWRTAIRQT 866
               |:.:..:.......|..||.    |:||            ::|.:|         :|....:
Human   457 ---KQIKQRERKNNTDTLYEVVC----LESE------------SERERR---------KTTASPS 493

  Fly   867 IMLNRMETENAMLQARQNENELKRIKLDYEEIV---------PCDKQLIERWEQIIERNSTQIGN 922
            :.|.:..::::::.:...::|    :.|.:|.:         .|.::::|.|.:::.:....:..
Human   494 VRLPQSGSQSSVIPSPPEDDE----EEDNDEPLLSGSGDVSKECAEKILETWGELLSKWHLNLNV 554

  Fly   923 KKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPVDTKRFPNFNTPYHMLLKHLTEHQHAIF 987
            :  ||.|...:|.|||.:.||:||..||..|: |...|:         .|.:|:...:....||.
Human   555 R--PKQLSSLVRNGVPEALRGEVWQLLAGCHN-NDHLVE---------KYRILITKESPQDSAIT 607

  Fly   988 IDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLGFICGVLLLHCDEANSFQLLK 1052
            .|:.||||.|.::||..|.||.||:.:.||||:.|.|:|||||..|:..|||||..|..:|.:|.
Human   608 RDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLV 672

  Fly  1053 HLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFP 1117
            .:||...:|..:..:.:....:.|||.||:::::||||.......:...:||:.|.||:|:::||
Human   673 KIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAHMYASQWFLTLFTAKFP 737

  Fly  1118 LGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEIMDYLKTVVPK--MEHTCMEQIM 1180
            |..|..:.|||..|...|||..|:.||...|..||..| ||..:.:.:..:||  ......:::|
Human   738 LYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTD-FEGALKFFRVQLPKRYRSEENAKKLM 801

  Fly  1181 KLVFSMDIG-KQLAEYKVEYNVLQEEITTTNHHLEMLNREKTQNQHLEQQLQFAQSSIA-QLETT 1243
            :|..:|.|. |:|.:|:.||:.::|:.......:|...||..:.|....:|:.....:| :|.|:
Human   802 ELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERENRRLQEANMRLEQENDDLAHELVTS 866

  Fly  1244 RSSQQAQITTLQSQVQSLE----LTIQTLGRYVGQLVEHNPDLELPNEVRRMLQQLDDLDRQ-RR 1303
            :.:.:..:...:.:..:|.    :|.|.|             ::...|.||:.::...|... ||
Human   867 KIALRKDLDNAEEKADALNKELLMTKQKL-------------IDAEEEKRRLEEESAQLKEMCRR 918

  Fly  1304 KPIFTERKIGKSVSVNSHLGFPLKVLEELTERDELGSPQKQKKEKTPFFEQLRQQ---------- 1358
            :....|.:|.|:.|:   :|...::..:|:||.|     ||:.......|::||:          
Human   919 ELDKAESEIKKNSSI---IGDYKQICSQLSERLE-----KQQTANKVEIEKIRQKVDDCERCREF 975

  Fly  1359 -QQQHRLNGGGQSSNV-GESGSPTPPSRPNRL--LDNASARTVMQVKLDELKLP--EHVDKFVAN 1417
             .::.|:.|...:..| .|.......:..|:|  ::...|:|.:|:...|.|:.  ||......|
Human   976 FNKEGRVKGISSTKEVLDEDTDEEKETLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALN 1040

  Fly  1418 IKSPLEVDSGVGT----PLSPPSTASNSSG 1443
                 ||.:...|    .||...||:...|
Human  1041 -----EVQAAKKTWFNRTLSSIKTATGVQG 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 65/294 (22%)
DUF3350 831..880 CDD:463365 6/48 (13%)
TBC 933..1152 CDD:214540 83/218 (38%)
COG4372 <1190..>1353 CDD:443500 35/168 (21%)
RABGAP1NP_036329.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..79 18/76 (24%)
PTB_Rab6GAP 145..273 CDD:269922 30/140 (21%)
DUF3694 307..437 CDD:463599 21/153 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..527 7/57 (12%)
TBC 563..772 CDD:214540 83/218 (38%)
SMC_prok_B <825..>1032 CDD:274008 44/227 (19%)

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