DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and tbc-12

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:NP_508458.1 Gene:tbc-12 / 180556 WormBaseID:WBGene00044061 Length:614 Species:Caenorhabditis elegans


Alignment Length:231 Identity:52/231 - (22%)
Similarity:92/231 - (39%) Gaps:49/231 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 DVSGFWHSLLVKLINEMFGFSHKTFDPAAKVKNKNAISALFEEFL-AAEKPDRSTAYEYICV--- 163
            :|..|:..|:..:|| ..|.:...::.....||...:.:|..... ::.:.|.::::..|.:   
 Worm   489 NVPNFFVYLVTSVIN-FLGINDLFYEIRLLQKNSQILYSLENTTTKSSARRDWASSHTQIQIADH 552

  Fly   164 -MYIKYLQQMNLHAELELFAAEKIAHPHEYQQEGSSYWKEECLALLKAADKC---TNN------- 217
             |.:.|:..::....|.::   .||....||:|.|:  ||.|       ||.   ||.       
 Worm   553 DMLLHYITDVDYEHSLLIW---HIATELCYQEEDSA--KENC-------DKSEYHTNRKISKIIS 605

  Fly   218 -----------RLRNNLLTIGKRLFNNTTANISKQTEAFFAILTYIDLCDNPVTA--EVWTGLRK 269
                       :|.:.:..|||..|.:|.|    :.:.||..:..|....|...|  |:.:....
 Worm   606 DYMMYLLIMQPKLMSEVAGIGKIRFRDTLA----EADRFFKKMGIIRDSRNVKLASKEILSADTS 666

  Fly   270 ICKRVIE--HGNEVLFFANNENFDENLKSALKVFGE 303
            |..|.::  |...|||.|:  :..:.|:...|.|||
 Worm   667 IEPREVKGNHSKSVLFEAS--SLAKELQRVEKNFGE 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 3/3 (100%)
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540
COG4372 <1190..>1353 CDD:443500
tbc-12NP_508458.1 TBC 295..521 CDD:214540 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.

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