DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and sgsm1b

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_073770421.1 Gene:sgsm1b / 100535556 ZFINID:ZDB-GENE-091117-39 Length:1497 Species:Danio rerio


Alignment Length:1280 Identity:239/1280 - (18%)
Similarity:418/1280 - (32%) Gaps:416/1280 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KSSAGQTSSSSAVASSMGG--------AASSSLTGNGLRHTLTASTSYGSLSSSAACAY----QL 143
            |||.   ||.|...||.||        .|...|....::|.:.:...||.|   |.|.:    :.
Zfish   441 KSSC---SSCSQNGSSDGGLPNGCNHDRAPLKLLCETMKHQIISRAFYGWL---AYCRHLSTVRT 499

  Fly   144 QLQQSAEASAEQPQNFMEFQGPITGLVYLLKDPKDPLLHIYLFECEAVEEMAELMHQMRDPAHTL 208
            .|.....|:..:|....:.:|.::..|:          ..:|.:|.|.|| .||:..:     ..
Zfish   500 HLSALVNATIVEPDIPYDAKGGLSADVW----------KSFLQDCSAYEE-EELLRLV-----YY 548

  Fly   209 GGSVGSIPQT----LIGGGGGSHGNSNGALNGIHAT--PATNLKMSEAMRNAQHDTSPN------ 261
            ||...|:.:.    |:|     |         .|.|  |....::.|.:|.....|...      
Zfish   549 GGVEPSLRKEVWPFLLG-----H---------YHFTMSPEERKEVDEQIRACYEQTMSEWLGCEA 599

  Fly   262 -----------PVSSKMKASKSYTHGLSSSSGTVNIPTSTSA----QSNLSLLADISPNHTHFFE 311
                       ...:|..:..|...| |....|::..:|.|:    ||:....:| |.:.|..| 
Zfish   600 IVRQREKEQHAAALAKCASGASVDRG-SRQDSTISTDSSQSSNSDKQSHAGSHSD-SNSSTQVF- 661

  Fly   312 VMYVGKIRVSQKRVPNTFIDDALPKFKAYDAQRLRLLQNRKMSLSSEGGVGIEAKPSSSLKSHDL 376
                |.            :|:..|                           ||::|         
Zfish   662 ----GS------------VDEVDP---------------------------IESEP--------- 674

  Fly   377 KEEDEEEQEQ-------------HKGHDDSQD-------SQAKPLVQLQLTGAEEGAAP----RP 417
            |.:||:.|.:             ..||..|::       |...|..:...|...:|..|    :|
Zfish   675 KPKDEKPQPKIPNGALPNCTSSPDSGHPSSRNFSVTSAMSDCSPSTEETSTQESKGNQPDIEEKP 739

  Fly   418 LEDNKENKSPEK---RPLLRGQSQIELGHKEHSDGSQPLAANSQLEAPNVIVNKQPT----PPRD 475
            .|:..||.|..:   :..:..|::.:|...|.|     .|...|::.   .::|.||    |..|
Zfish   740 KEEQPENSSTTQNTDKAAITTQNKSKLQTSETS-----RAETDQIKD---AISKNPTNLSEPKED 796

  Fly   476 Q-GVGTGTASASAGPSQLHPNYAMDNIPKQRDRSA----SQGCIPPYVEQNRTMVFLVGRCDLRL 535
            : ..|..|..:.....::.|:    ..|.:..||:    ::...|               ..|.:
Zfish   797 EVNAGAETRKSEVNKCEVQPS----RDPAEESRSSESKQAEDADP---------------VSLSI 842

  Fly   536 ISPDRKQVLLYKDFKDVASCVHGQKSLDHFGIICRELNNDGYIGYVFKCQS---EHVCDDIVAAI 597
            :..|.|                 ..:....|:   ::|.|.      |.|.   |...:|    :
Zfish   843 VDEDTK-----------------SNTEQEIGL---KVNEDS------KSQQSAPESTPED----V 877

  Fly   598 AQAFDTCAEQKKKQDTQIFSCEHCPMLWYHKLCTD-------VEGLSEKKTQALILRRIETLSDD 655
            ..:.:..:|...||:|.:            |:..|       .|..||..|.:   :.:.:.|:.
Zfish   878 KTSQNLSSESNTKQETSL------------KVSEDSKCQPSAPESTSEAMTTS---QNLSSESNT 927

  Fly   656 EQEIVWAKFCGSEKTNSPVAEQNQFLMMLLRAHCESRQQRHVHD---TAENRSEFLNQYLGGSTI 717
            |||           |...|.|.::         |:........:   |::|.|            
Zfish   928 EQE-----------TGLKVNEDSK---------CQPSAPESTSEDMKTSQNIS------------ 960

  Fly   718 FMKAKRSLTNSFDNLLKRKPSKDDIAVP---------SHNLRD-----------IREGS-AEPLG 761
                ..|.|.....|...|.||.:.:.|         |.||..           :.|.| .:|..
Zfish   961 ----SESNTEQETGLKVNKDSKSEQSAPKSTPEHMKTSQNLLSELNMEQATGLKVNEDSKCQPSA 1021

  Fly   762 TQSPPEGFRSRSNTVGASPSSKPTAEQLKSPMMDIFIKVG-------NSPKEAETHQGSWRQAIL 819
            .:|.||..::..|....|.:.:.|.           :||.       ::||....|..:.:..:.
Zfish  1022 PESTPEAMKTSQNISSESNTQQETG-----------LKVNKDSKSEQSAPKSTPEHMKTSQNLLS 1075

  Fly   820 NSVVTPSKGL----DSE----VPTEFLSPMRKPAKRGKRDAAELRELWRTAIRQTIML----NRM 872
            ...:..:.||    ||:    .|...|..|    |..:..::..:.:.:|| .|||..    || 
Zfish  1076 ELNMEQATGLKVNEDSKCQPSAPESTLDDM----KTSQNLSSGPQNVPQTA-PQTISWDSEHNR- 1134

  Fly   873 ETENAMLQARQNENE-------LKRIKLDYEEIVPCDKQLIERWEQIIERNSTQIGNKKDPKVLG 930
             ..:.:.|..::|:|       |.:...|..:..|...::.|....::.. |::....:.|..|.
Zfish  1135 -ARSIIKQMTESESESCGPLTSLSKPSPDMSDDSPSALEMEEIPSSVVYM-SSETSMCRTPLTLA 1197

  Fly   931 HAIRTGV---PRSKRGDVWTFLAEQHSMNTAPVDT------------KRFP-------------- 966
            ..:...:   .:|..|.....|..:..:||.|..|            ..||              
Zfish  1198 RPVAPCIAAGEKSPMGMPALELCMEPGVNTTPEGTDSALSEEEPEMDNLFPKPDSLAVTGDKNDI 1262

  Fly   967 -----NFNTPYHMLLKHL-TEHQHAIFIDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDPEL 1025
                 :..|.|...|..| |.:.|.|..|:.|...|: :|..|..|.:|.  |::.:|.....::
Zfish  1263 ASPVSSIGTTYSQELVDLYTLNLHRIDKDVQRCDRNY-WYFTPANLEKLR--NIMCSYVWQHLDI 1324

  Fly  1026 GYCQGL-GFICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDL 1089
            ||.||: ..:..:|::..|||.:|.....||.|.|....:...|......:..|.:::...|.:|
Zfish  1325 GYVQGMCDLLAPLLVILDDEAMAFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFEL 1389

  Fly  1090 YVWLDQN-DVSPTLYAAPWILTVFSSQFPLGFVARVFDLL----FLESSDVIFKFAIALLSVHKQ 1149
               :.|| |.:...:...|.|..|..:.....|..|::.:    :..|...:...|:||:.:::.
Zfish  1390 ---MQQNGDYTHFYFCYRWFLLDFKREMVYDDVFSVWETIWAARYASSEHFVLFIALALVELYRD 1451

  Fly  1150 QLLAKD-NFEEIMDYLKTV-----VPKMEHTCMEQIMKLVFSMDI 1188
            .:|..: :|.:|:.:...:     |||:          ||.:.|:
Zfish  1452 IILENNMDFTDIIKFFNEMAERHDVPKL----------LVMARDL 1486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 55/338 (16%)
DUF3350 831..880 CDD:463365 12/56 (21%)
TBC 933..1152 CDD:214540 54/259 (21%)
COG4372 <1190..>1353 CDD:443500
sgsm1bXP_073770421.1 None
Blue background indicates that the domain is not in the aligned region.

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