DRSC/TRiP Functional Genomics Resources

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Protein Alignment plx and tbc1d4

DIOPT Version :10

Sequence 1:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster
Sequence 2:XP_004911887.2 Gene:tbc1d4 / 100379738 XenbaseID:XB-GENE-980839 Length:1274 Species:Xenopus tropicalis


Alignment Length:1257 Identity:390/1257 - (31%)
Similarity:604/1257 - (48%) Gaps:289/1257 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 ALNGIHATPATNL------KMSEAMRNAQH--------DTSPNPVSSKMKASKSYTHGLSSSSGT 283
            ||||.:|..|..:      .:|..:.|:|.        .|.|:...|:|..   :....::....
 Frog    89 ALNGANANSAVFIFEHKAQHISRFIHNSQDPSYFAYLIKTQPDNPESEMAC---HVFKANTPRQV 150

  Fly   284 VNIPTSTSAQSNLSLLADISP--------NHTHFFEVMYVGKIRVSQKRVPNTFIDDALPKFKAY 340
            .:|.:|....|.::|..|..|        .::..|||:|.||:.::.|:.|:|.:||.:.||..:
 Frog   151 SDIISSIRQVSKVALKEDSKPCRDSEDAFYNSQKFEVLYCGKVVIANKKAPSTLVDDCIEKFSQH 215

  Fly   341 DAQRLRLLQNRKMSLSSE----GGVGIEAKPSSSLKSHDLKEEDEEEQEQHKGHDDSQDSQAKPL 401
            :.|||:.|..::.:..|.    ..:.:...||......|.:.......|.|.|. .:..||:   
 Frog   216 ERQRLKSLNEQQSAECSTDFSLAEIDVPGSPSDMFLEQDSENNFIPSSEHHSGM-FTVGSQS--- 276

  Fly   402 VQLQLTGAEEGAAPRPLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQLEAPNVIV 466
               .|.|:......|.|||:......|.|                            ....:|.:
 Frog   277 ---NLIGSRVTFPERILEDSGFEDQQEFR----------------------------TRCSSVTI 310

  Fly   467 NKQPTPPRDQGVGTGTASASAGPSQLHPNYAMDN--IPKQRDRSASQGCIPPYVEQNRTMVFLVG 529
            :|:                           |.||  .|::|..||.....|...|:||||:|.||
 Frog   311 HKR---------------------------AQDNKIQPRRRHASAPSHVQPTDSEKNRTMLFQVG 348

  Fly   530 RCDLRLISPDRKQVLLYKDFKDVASCVHGQKSLDHFGIICRELNNDG---YIGYVFKCQSEHVCD 591
            |.::.|||||.|.|.|.|:|||::||..|.|.:||||::|||....|   ||.|||:|.||.:.:
 Frog   349 RFEINLISPDTKTVELEKNFKDISSCSQGIKHIDHFGLVCRECVEPGINQYICYVFQCASEALVE 413

  Fly   592 DIVAAIAQAFDTCAEQKKKQDTQIFSCEHCPMLWYHKLCTDVEGLSEKKTQALILRRIETLSDDE 656
            :::..:.|||.|.|..:..: |||..||.|||...||||..:|||...:.:.:|.:::..|:|:|
 Frog   414 EVMLTLKQAFSTAAALQSAK-TQIKLCEACPMHALHKLCERIEGLYPPRAKLVIQKQLSLLTDNE 477

  Fly   657 QEIVWAKFCGSEKTNSPVAEQNQFLMMLLRAHCESRQQRHVH--------------DTAENRSEF 707
            |..::.:....:.|:.  .|:|:.:::.||..||::|:.|||              :.|.....|
 Frog   478 QADIFERVQKMKATSD--QEENELVILHLRQLCETKQKTHVHIGEVQQNLPCNTVPENAAPSGRF 540

  Fly   708 LNQYLGGSTIFMKAKRSLTNSFDNLLKRKPSK-------DDIAVPSHNLRDIREGS--------- 756
            ....|..     |||:|||:|.:|:..|..:|       .|.....::....::||         
 Frog   541 KLDILKN-----KAKKSLTSSLENIFSRGTNKMRGRLGSMDSFERCNSFTSDKDGSPGDSPPATP 600

  Fly   757 -AEPLGTQSPP-----------------------EGFR--------------------SRSNTVG 777
             :.|:.:..||                       .|.|                    |.:|.||
 Frog   601 PSSPVSSSCPPFPEEDPDSPKVRRRAHTFSHPTSSGKRRITFPDSKSPSARFPLQRQNSLANDVG 665

  Fly   778 ----------------ASPSSKPTAEQLKSPMMDIFIKVG--------NSPK-EAE--------- 808
                            :|.||.|::....|.:.:.:...|        ::|| |:|         
 Frog   666 QSSPVPIARRFRTESESSSSSLPSSFSAPSFLKNFYQNSGRHVPQSENDTPKSESEGRRRTFSSC 730

  Fly   809 -------------THQGSWRQAILNSVVTP---------SKG---LDSEVPTEFLSPMRKPA--- 845
                         .|:.||||.|...|.:|         .||   ::..:|   |||: .||   
 Frog   731 SNDSLNASGSCLIPHRISWRQRIFLRVASPMTNSLSDMQHKGQLDVNDLLP---LSPL-PPAMEE 791

  Fly   846 ---------------KRGKRDAAELRELWRTAIRQTIMLNRMETENAMLQARQNENELKRIKLDY 895
                           ..|||.:.:.:.||:.||.|.|:|.|||.||..|:|.::|.:.:::||||
 Frog   792 DPLAALLQAEDSALQSEGKRSSEDFQNLWKKAIHQQILLLRMEKENMKLEASRDELQSRKVKLDY 856

  Fly   896 EEIVPCDKQLIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHSMNTAPV 960
            ||:..|.|:::..|::.:... |:|  :.|.:.:...::.|||:.|||::|.||:.|:.:.    
 Frog   857 EEVGLCQKEVLNLWDKKLNCR-TKI--RFDMEEIFATLKEGVPKGKRGEIWQFLSVQYRLR---- 914

  Fly   961 DTKRFPNFNTP----YHMLLKHLTEHQHAIFIDLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSIL 1021
              .|.|:...|    |:.|||.||..||||.:|||||||.|.::...||.|||||:|||||||:|
 Frog   915 --HRLPSKQQPSDVSYNDLLKQLTAQQHAILVDLGRTFPTHPYFSAQLGAGQLSLYNLLKAYSLL 977

  Fly  1022 DPELGYCQGLGFICGVLLLHCDEANSFQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHL 1086
            |.|:|||||:.|:.||||||..|..:|::||.||:....|.:|.|||...|:|:||||||:.|:.
 Frog   978 DKEVGYCQGISFVAGVLLLHMSEQQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYH 1042

  Fly  1087 PDLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQL 1151
            .|||..|::|:::|:||||||.||:|:|||||||||||||::||:.::||||.|:.|||..:..:
 Frog  1043 RDLYNHLEENEINPSLYAAPWFLTLFASQFPLGFVARVFDIIFLQGTEVIFKVALCLLSNSEALI 1107

  Fly  1152 LAKDNFEEIMDYLKTVVPKMEHTCMEQIMKLVFSMDIGKQLAEYKVEYNVLQEEITTTN------ 1210
            :|:|:||.|:|:||:::|:|.:..||:|:..||.|||.|||..|:|||:|:.:|:...:      
 Frog  1108 MARDSFESIVDFLKSMIPEMTNETMEKIITQVFEMDISKQLHAYEVEYHVINDEMLEASIPSDDN 1172

  Fly  1211 ---HHLEMLNRE-KTQNQHLEQQLQFAQSSIAQLETTRSSQQAQITTLQSQVQSLE-------LT 1264
               |.||..|.: |.||..|.::||.|.:.|..||:...:..::...|::.|:|:|       ..
 Frog  1173 ESFHKLEKSNNQLKRQNMDLLEKLQVAHTKIQSLESNVENILSRENKLRNVVRSMEEERSAYQNV 1237

  Fly  1265 IQTLGRYVGQLVEHNPDLELPN 1286
            .:.:.:||...|..:.:|.|.|
 Frog  1238 FELMKKYVPTNVLTDCELLLKN 1259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967 88/316 (28%)
DUF3350 831..880 CDD:463365 21/66 (32%)
TBC 933..1152 CDD:214540 118/222 (53%)
COG4372 <1190..>1353 CDD:443500 33/114 (29%)
tbc1d4XP_004911887.2 PH-like 26..173 CDD:473070 19/86 (22%)
PTB_TBC1D1_like 176..423 CDD:269967 86/308 (28%)
DUF3350 788..841 CDD:463365 16/52 (31%)
TBC 894..1108 CDD:214540 118/219 (54%)

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