Protein Alignment Rab23 and rab20

DIOPT Version :9

• Sequence 1: NP_649574.1
• Gene: Rab23 / 40701
• FlyBaseID: FBgn0037364
• Length: 268
• Species: Drosophila melanogaster
• Sequence 2: XP_012812505.1
• Gene: rab20 / 550049
• XenbaseID: XB-GENE-494912
• Length: 272
• Species: Xenopus tropicalis
• Alignment Length: 225
• Identity: 55/225 - (24%)
• Similarity: 98/225 - (43%)
• Gaps: 48/225 - (21%)

  Fly     2 RLIQTAT--GGAAASVLQTHSQAQYNYTSMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTK 64
            ||..|.:  |...:.|:|   :..:..:||::.|    :|:|::|:..|||:|::.||.:..| :
 Frog    22 RLDATGSKDGRPGSDVMQ---RLWFQTSSMKKPD----LKLVLLGDMNVGKTSLLHRYMERRF-Q 78

  Fly    65 DYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIK 129
            |...|:|..|..:|    .....|.:|||||:|:|..:...|.|.|.|.:|.:..::..|...::
 Frog    79 DTVSTVGGAFYLKQ----WGPYNISIWDTAGREQFHGLGSMYCRAASAVILTYDVSNMQSLLELE 139

  Fly   130 DWKRKVENECN-EIPTVIVQNKIDL--------------------IEQAVVTADEVETLAKLLNC 173
            |....:.:..| :....:|.|||||                    |.:.|...|.:....:::..
 Frog   140 DRFLGLTDTANDDCIFAVVGNKIDLTDDYDSESDMEGERPRTSSKIRKQVDLEDAIALYKRIMKY 204

  Fly   174 RLI-------------RTSVKEDINVASVF 190
            :::             .||.|...||..:|
 Frog   205 KMLDENVVPAAEKMCFETSAKTGYNVDGLF 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab23	NP_649574.1	Ras	50..199	CDD:278499	41/175 (23%)
		Rab23_like	50..197	CDD:133306	41/175 (23%)
rab20	XP_012812505.1	Rab20	53..272	CDD:133326	46/187 (25%)
		Ras	54..235	CDD:278499	46/186 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010