Protein Alignment Rab23 and Rab1

DIOPT Version :9

• Sequence 1: NP_649574.1
• Gene: Rab23 / 40701
• FlyBaseID: FBgn0037364
• Length: 268
• Species: Drosophila melanogaster
• Sequence 2: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Alignment Length: 206
• Identity: 69/206 - (33%)
• Similarity: 105/206 - (50%)
• Gaps: 26/206 - (12%)

  Fly    23 QYNYTSMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVR 87
            :|:|          ..|::::|:.|||||.::.|:....:|:.|..||||||..|.||:||:.::
  Fly     7 EYDY----------LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61

  Fly    88 IMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVEN-ECNEIPTVIVQNKI 151
            :.:|||||||.|..||.:|||||...::|:..||:.||:.:|.|..::|. .|..:..::|.||.
  Fly    62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126

  Fly   152 DLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSS 216
            ||..:.||........|..|....:.||.|...||...|..:|.:.               :|..
  Fly   127 DLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEI---------------KNRV 176

  Fly   217 HPPYSSTPTIS 227
            .||.|:|...|
  Fly   177 GPPSSATDNAS 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab23	NP_649574.1	Ras	50..199	CDD:278499	56/149 (38%)
		Rab23_like	50..197	CDD:133306	56/147 (38%)
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	62/189 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454411
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940