DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and RAB19

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001008749.2 Gene:RAB19 / 401409 HGNCID:19982 Length:217 Species:Homo sapiens


Alignment Length:210 Identity:68/210 - (32%)
Similarity:123/210 - (58%) Gaps:18/210 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAG 95
            :::.:...|::::|:..|||:.::|.:..|::|:..:.||||||..|.::|||:.|::.:|||||
Human    11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAG 75

  Fly    96 QEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVEN-ECNEIPTVIVQNKIDLIEQAVV 159
            ||.|..||::|||.|.|:::.:..|.|::|::|..|..::|. ....:..:::.||.||.|:..|
Human    76 QERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHV 140

  Fly   160 TADEVETLAK---LLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQS----YDQVAGNQQNSSH 217
            ..::..|||:   ||  .::.||.||..|:..||..:|   .:|:.::    |.:.|.|..    
Human   141 LFEDACTLAEKYGLL--AVLETSAKESKNIEEVFVLMA---KELIARNSLHLYGESALNGL---- 196

  Fly   218 PPYSSTPTISAFSPT 232
             |..|:|.:.|..|:
Human   197 -PLDSSPVLMAQGPS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 55/150 (37%)
RAB19NP_001008749.2 Rab19 15..179 CDD:133267 59/168 (35%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 6/14 (43%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 9/14 (64%)

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