DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and Rab21

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster


Alignment Length:174 Identity:66/174 - (37%)
Similarity:98/174 - (56%) Gaps:6/174 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEI-DGEDVRIMLWDTAGQEEF 99
            |..|.|::|.|.|||:|::.||.:..|...:..|:...|:.|::.: ||...::.:|||||||.|
  Fly    12 LNFKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERF 76

  Fly   100 DCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKV-ENECNEIPTVIVQNKIDLIEQAVVTADE 163
            ..:...||||:..::||:..|||.||..:|.|.|:: :....||..:||.||.||.||..||.||
  Fly    77 HALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDE 141

  Fly   164 VETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQ 207
            ....|:.:..:.:.||.||:..||.:|..|.    |||.:...|
  Fly   142 ALQYARTVGAQYVETSAKENEGVAELFELLT----QLMLEQLSQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 55/148 (37%)
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 63/165 (38%)

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