Protein Alignment Rab23 and Rab5

DIOPT Version :9

• Sequence 1: NP_649574.1
• Gene: Rab23 / 40701
• FlyBaseID: FBgn0037364
• Length: 268
• Species: Drosophila melanogaster
• Sequence 2: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Alignment Length: 223
• Identity: 72/223 - (32%)
• Similarity: 114/223 - (51%)
• Gaps: 20/223 - (8%)

  Fly     8 TGGAAASVLQTHSQAQYNYTSMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGV 72
            :|||:.    |.:..:.|.||..:   ....|:|::|...|||||::.|:.||.|.:..:.|||.
  Fly     7 SGGASG----TGTAQRPNGTSQNK---SCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 64

  Fly    73 DFLERQIEIDGEDVRIMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVEN 137
            .||.:.|.|:...|:..:|||||||.:..:...|||||||:::|:...::.||...|.|.:::..
  Fly    65 AFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHK 129

  Fly   138 ECNEIPTVIVQ---NKIDLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQ 199
            :.:  |.:::.   ||.||....||..||.:..|:......:.||.|..:||..:|..:|.|..:
  Fly   130 QAS--PNIVIALAGNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPK 192

  Fly   200 LMTQSYDQVAGNQQNSSHPPYSST--PT 225
                  :..|.||..|..|..:.|  ||
  Fly   193 ------NDGANNQGTSIRPTGTETNRPT 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab23	NP_649574.1	Ras	50..199	CDD:278499	52/151 (34%)
		Rab23_like	50..197	CDD:133306	51/149 (34%)
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	57/163 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454230
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24073
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	3.040