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Protein Alignment Rab23 and rab-5
DIOPT Version :9
Sequence 1: | NP_649574.1 |
Gene: | Rab23 / 40701 |
FlyBaseID: | FBgn0037364 |
Length: | 268 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_492481.1 |
Gene: | rab-5 / 172755 |
WormBaseID: | WBGene00004268 |
Length: | 208 |
Species: | Caenorhabditis elegans |
Alignment Length: | 161 |
Identity: | 53/161 - (32%) |
Similarity: | 93/161 - (57%) |
Gaps: | 5/161 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 KVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQEEFDCIT 103
|:|::|...|||||::.|:.||.|.:..:.|||..||.:.:.:|...::..:|||||||.:..:.
Worm 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLA 85
Fly 104 KAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNEIPTVIVQ---NKIDLIEQAVVTADEVE 165
..|||||||:::|:..|::.||...|:|.::::.:.: |.:::. ||.|:..:..|..:|..
Worm 86 PMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQAS--PNIVMALAGNKADVANKRTVEYEEAN 148
Fly 166 TLAKLLNCRLIRTSVKEDINVASVFRYLATK 196
..|:......:.||.|..:||..:|..:|.|
Worm 149 AYAEDNALLFMETSAKTSMNVNDIFMAIAKK 179
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1340129at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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