DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab23 and Rab1

DIOPT Version :10

Sequence 1:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_061497112.1 Gene:Rab1 / 1273973 VectorBaseID:AGAMI1_003967 Length:201 Species:Anopheles gambiae


Alignment Length:228 Identity:74/228 - (32%)
Similarity:112/228 - (49%) Gaps:33/228 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QYNYTSMREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVR 87
            :|:|          ..|::::|:.|||||.::.|:....:|:.|..||||||..|.|::||:.::
Mosquito     4 EYDY----------LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 58

  Fly    88 IMLWDTAGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVEN-ECNEIPTVIVQNKI 151
            :.:|||||||.|..||.:|||||...::|:..||..||:.:|.|..::|. .|:.:..::|.||.
Mosquito    59 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGNKC 123

  Fly   152 DLIEQAVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSS 216
            ||..:..|.......||..|....:.||.|...||...|..:|.:.               :|..
Mosquito   124 DLQTKKRVDTTTAMELANQLGIPFLETSAKNATNVEQAFMTMAAEI---------------KNRV 173

  Fly   217 HPPYSSTPTISAFSPTFTKSSSGTIVLRPAKKG 249
            .||.|     :|..|:..|...|..|  .||.|
Mosquito   174 GPPSS-----AADPPSAVKIDKGRNV--EAKSG 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 55/147 (37%)
Rab1XP_061497112.1 None

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