DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg17 and rb1cc1

DIOPT Version :9

Sequence 1:NP_649573.2 Gene:Atg17 / 40700 FlyBaseID:FBgn0037363 Length:1357 Species:Drosophila melanogaster
Sequence 2:XP_002934149.2 Gene:rb1cc1 / 100127640 XenbaseID:XB-GENE-984583 Length:1576 Species:Xenopus tropicalis


Alignment Length:1609 Identity:371/1609 - (23%)
Similarity:601/1609 - (37%) Gaps:565/1609 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLYVFHVDVGRMLSFDMNVALQPVEHLKETIQKLHNIPAANIVLLVSGGEMLTHSTQVSCYSAG 65
            |.||||.|:.|..|:||..:|:|.|..||..||..:.|...:.:|:|:|||.:....:|..||||
 Frog     1 MKLYVFLVNTGTTLTFDTELAVQTVTDLKHAIQTKYKIAVHHQILVVNGGECMASDRRVCSYSAG 65

  Fly    66 TDTNPIYMF---LTGDERLPPTIYNS--DADNELRRQVEESHRLPPALETVRQRAQLAQHMRELA 125
            ||||||::|   :...|| ||.|..:  .|:||:..:||||..:|....||..|.|||..|.|:|
 Frog    66 TDTNPIFLFNKEMILCER-PPVIPRTTFSAENEMELKVEESLMMPAVFHTVASRTQLAVEMYEVA 129

  Fly   126 RKEEDQCERLVHEQHLQQQGWSAVVANMEDLTNEFCDRFQNFCSFFDRHLQKRESFLELLRNFPD 190
            :|....||.|||::|||.|||:|::||:||.|:.:......|.:.:.:::|..:.....|.|...
 Frog   130 KKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENAYTKYIQSIDDIKVKLTNLGT 194

  Fly   191 DLKQLGRIPILPDLMSLAEADFHGFDELLD---NDDVFTAQQQPTPQQQALTESSQADSPN---- 248
            .:..:.:||:|..|..      |.:...||   :.:|:|.:.:.......:....:|...|    
 Frog   195 AVSVMAKIPLLECLTR------HSYRMCLDRLTSTEVYTEEMENAKVDNVVQYDEEAKLKNVALL 253

  Fly   249 --------KKLK--MGDEVETESGEQTERGVQTLTSSSSLARRP--NLNLLQWISSKGNHRALQL 301
                    ::||  .|.:...|:.:.:.:.:: |:..:.....|  |::||.||:.:.....::.
 Frog   254 ASLSMSVEEQLKEVTGKDTGQENNKSSTQNME-LSEPNDSENLPSFNVSLLDWINVQDRPNDVES 317

  Fly   302 MSDECIQGLDVFSVEIYEKLKEEVNQ-IIKLANQADVKEIKGLGDRLCKLEEFKFRIKKMVQEQK 365
            :..:|...:......|.:....|..| :.||.|| ::|.||||.|||..|::......::|.|||
 Frog   318 LVRKCFDSMSRLDPRIIQPFLAECRQTVAKLDNQ-NMKAIKGLEDRLYALDQMIASCSRLVNEQK 381

  Fly   366 EQALALQQNEARAQNLRDNSVLPDLCLSHRSQLQVMLDNHIKIREYCRCIANSKDELGWNLHTRL 430
            |.|.....|:.||:||:|.||||||||||.:||.:||.||.|:.:..:....:|.||..||..||
 Frog   382 ELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRL 446

  Fly   431 RRIVWIENGMSEFDNRLLFNHRCLRRAERHICIIEQIHRAPSTYVSAVAEVVRRKIFSDEFRQWA 495
            :...::.....:...:|....|.|......|.|:|.:...|..|..||.||||||:|...:|:|.
 Frog   447 KWCCFVMLHADQDGEKLQALFRLLTELVERIKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWT 511

  Fly   496 TRLSADFDRIHSEELSRRRDFNASFEGHFL-NILFPGMGDMPPAFANEHPLSFDTRLPSLSRSDM 559
            ..|..|...::..|..:|..|...|...:| |.||.|:...||:|....|..||:.||.:|.:|:
 Frog   512 NSLVKDGKSLYETEKIKRESFGKLFRKSYLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISVNDL 576

  Fly   560 ELLSSQL-PELAGQLQLP---DMKPVIDFFALRSDKNVEPDQEQERDIPLMAPRLAELQAQAAAS 620
            ..|.... ||:...|::|   |.:|:...  :|:..|:   .:..:.:..|:..:.:|..:..||
 Frog   577 RFLQCICPPEVQLFLRVPLLCDFEPLHQH--VRALHNL---VKAAQSLDEMSQTITDLLNEQKAS 636

  Fly   621 D------CET----DTETEFEKLSTTSKCVATSISTSL-------------VEQVAQST------ 656
            :      |.|    |:.||    :||:....|.:|.||             :|:::..:      
 Frog   637 NSQLSPQCITTQRIDSATE----ATTTTSSKTPLSLSLQGPICPAVNAPGPLEELSPDSIDAHTF 697

  Fly   657 --------ATEDLLMLSAGTL---------------------TEENAGS------------FEKM 680
                    .||.  .|..|:|                     .|||..|            .|.:
 Frog   698 DFETIPHPGTEQ--SLKQGSLDMDSLADSPESDFMSAVNEFVIEENPISPNISDTQSPEMMVESL 760

  Fly   681 RS------------DMESMTK----LARACLA-------EARSNVGVFRSDVA------------ 710
            .|            |.:|..|    .:|.||.       |:::::..|:.|::            
 Frog   761 YSSVINAIDNRRMQDTKSKVKDENISSRVCLEKCKILAHESQTSLRNFKEDLSYLKILVQREQKN 825

  Fly   711 ----------------------------------------NYQDELQ------------------ 717
                                                    :||..||                  
 Frog   826 FASAIKSVSANIYDTVDKVKLSIETALKEKHLEELQVLEQSYQKRLQLSKEQFDENEKQLKSDLA 890

  Fly   718 ----------SELHLLRDKCNVLKMMCEEREQK---LQEKLDEMSLKLQLAEQEKQAAVAQARE- 768
                      :|..|:|::......:..|..:|   |:..:.|.:.::|...|.::||:...|: 
 Frog   891 KLKEHLKNRDNEFALIRNENETFLCLQSEHNEKIISLENTMKEQACEIQQLRQYREAALEDIRKL 955

  Fly   769 --------QLIHE--------------------HKTELESL------------------------ 781
                    :|:.|                    |..|:|||                        
 Frog   956 HAENEEKLRLLKEDLMILEQTHLKELEDNLKLRHAQEMESLTSDHNHSQERVKQDHKRMVDQLVE 1020

  Fly   782 --------------------------RCRFKLMTSMERSPSD----------------------- 797
                                      ||:.::..:::.:..|                       
 Frog  1021 SYNTTIHEKDSRLQEKDLRVSELSDNRCKLEVELALKEAEIDEIKLLLEECKAQQQEVMKCQINK 1085

  Fly   798 --SSLEK-IERPTSSASV---------------VSANAGVDIDHLLAQQR------QELLAQRER 838
              .:||| |.|..|...|               :||...:.|..||.:..      ||.::...|
 Frog  1086 KTETLEKEILRLNSLIRVQDDKQEQGLVELEALLSAEKNLCISELLNRHETETSLFQEEISSLTR 1150

  Fly   839 AISEAVDSERSLWQ------SRL---------------LPLNSESVMANVGILK-------DMLA 875
            |..:|:::|..|.|      |||               ..||.:.:.....|.|       .:||
 Frog  1151 AHKQALETECGLCQQVNELRSRLDENVKALEKQTELQEKTLNEQKMKYETAIQKLEEEQEQILLA 1215

  Fly   876 DK-----------------------------------ERQLDQ-----------------LREQ- 887
            .|                                   |:|::|                 |:|| 
 Frog  1216 QKQEKELLLQTFAHEKEEAVKKFKAIEQELLEKVCQVEQQVNQSSTEFAVPENAPSLVYKLQEQL 1280

  Fly   888 -------------------------------------NKILTQETY-------QLKTRLEMITNE 908
                                                 |.:||:|..       ::..:|:|:|.:
 Frog  1281 QKEKQSFTEQLEHQERKRNEEMQSLKISLIAEQQTNFNTVLTRERVKKENIISEINEKLKMVTQQ 1345

  Fly   909 DGNSWLKEKIDYLNKDKCRLEEE---LSQEKSR-------------------------------- 938
            ....  |:.|:.|::|:.||.||   |.:|.:|                                
 Frog  1346 QDRD--KDLIETLSEDRARLLEEKKKLEEEVARLHSSNVAMLAQVTVASEPSGASAPDFPSEIDR 1408

  Fly   939 ---------RQEMESSVAAMRSSAYDLNVGGP-------------------------LTRSKSGV 969
                     .:::|.|:.....:.:||.:...                         :::|.|.|
 Frog  1409 PNFDATVFEEEKLEPSIETSMMAVHDLTLSEEKQKIMQLERTLQLKEEENKRLNQRLMSQSMSSV 1473

  Fly   970 SSSH-RSIALEGCARGDLVFVVWSMRHAQFMVVQDSLTLYFVHADSLASLQLTAPTSPTPSLDPS 1033
            ||.| ..||:.....||||.::...||..:::...|.||||:|::||:||.| .|.|.: |..| 
 Frog  1474 SSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLSSLDL-KPASGS-SRRP- 1535

  Fly  1034 QTVVDINQIPLPYYAIGRVIDKEYCQARKDDNRYRVSRGSKFYRIKLAP 1082
                         :.:|:|::||||||:|..||::|..|:||||:|..|
 Frog  1536 -------------WVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVP 1571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg17NP_649573.2 ATG11 943..1082 CDD:287363 51/164 (31%)
rb1cc1XP_002934149.2 Ubl_RB1CC1 2..76 CDD:340580 34/73 (47%)
SbcC 830..>1362 CDD:223496 73/533 (14%)
ATG11 1447..1571 CDD:402135 47/139 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 306 1.000 Domainoid score I1356
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 305 1.000 Inparanoid score I2599
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56800at33208
OrthoFinder 1 1.000 - - FOG0007474
OrthoInspector 1 1.000 - - oto105209
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5138
SonicParanoid 1 1.000 - - X6346
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.000

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