DRSC/TRiP Functional Genomics Resources

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Protein Alignment Xe7 and akap17a

DIOPT Version :9

Sequence 1:NP_730984.1 Gene:Xe7 / 40699 FlyBaseID:FBgn0010772 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001128287.2 Gene:akap17a / 100038187 XenbaseID:XB-GENE-486903 Length:661 Species:Xenopus tropicalis


Alignment Length:737 Identity:233/737 - (31%)
Similarity:373/737 - (50%) Gaps:134/737 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QTIENVADCIPFYLPHSLYLKPLAKMQISVSLPTIKS-GKSVSNLEIMDKLGAELKPDKFLLLKV 68
            :.:|....|       .|||||:.||.|||:||.:|. |||:||.|:|::|...:...:|..|::
 Frog    12 EAVELCGSC-------GLYLKPITKMIISVALPQLKQPGKSISNWEVMERLKGMVNNHQFSTLRI 69

  Fly    69 SKSTVNTIRLEAELDERKRLRAAIQRLDGISLRISGFSESFRVRCAESKDDFPTRHDWDSYFRDA 133
            ||||::.||.|.|::.:..::..:..|||.|:::||||:..:||..|.|.||||||||||:||||
 Frog    70 SKSTMDFIRFEGEVENKSLVKTFLAALDGKSIKLSGFSDILKVRAVEYKLDFPTRHDWDSFFRDA 134

  Fly   134 RNMDEMKAGERPDTIHISHLPMRWFCPRHSEHEENVKPSENIFKRIFEKFGRVRMVDIPICDPYR 198
            ::|:|...||||||||:..||.:||..:.|..|   ||:|::..::|..||.:||||||:.||||
 Frog   135 KDMNESLPGERPDTIHLEGLPCKWFALKDSGSE---KPNEDVLIKVFNLFGEIRMVDIPMLDPYR 196

  Fly   199 KSMQADINGMRTFSFEQDVLFEGYVQFEEYSSFVRAMDEFRGNKLVRKFVD-KTQAINICVSFDK 262
            :.|..  ....||||...:.||.|||::||..||:||:..||.||:.|..| |..|.||.||||.
 Frog   197 EEMTG--RSFHTFSFGGHLNFEAYVQYKEYVGFVKAMNALRGMKLMYKGEDGKAVACNIKVSFDS 259

  Fly   263 QKHLSDSNI--------------QRRERIRKKFIAKAKAEDEEREKLKKQQE-EELDRERQKQEE 312
            .||||:::|              ||||..::|   :.:||:.::|:.:||:| ||:::||::.|:
 Frog   260 TKHLSEASIKKRQLERQKLQELEQRREEQKRK---EKEAEERQKEEERKQKELEEVEKERKRIEK 321

  Fly   313 LKKAEAEKQREREERRKEKHMKKIQERGQVEISQKIRIEERKLMIAQRKLESIRTLEKLFERIQL 377
            :::.| |||:|||.||.:|.::|||...|.::.:|||.|||:|::|||.|:|||.:.:|..::  
 Frog   322 IRRKE-EKQKEREARRNKKKLQKIQAEEQKKLQEKIRFEERRLLLAQRNLQSIRIIAELLSQV-- 383

  Fly   378 KQRDKNRRVKQDDDKDIQRGRLVEKYKAATEKLVCDQRKIVQEIKSNTPLLGL------LKSKSK 436
                |..::.:.::.:.:|.||::..:...|:..  :.|.|:|.|...  |||      |:.|..
 Frog   384 ----KATKLNEQEEMEAERLRLLQLEERRKEQEA--ELKRVEEEKQRA--LGLQRKERELREKLV 440

  Fly   437 KS----AVPVDASSEDEAA----------ASKRHKMGNGVTESA---PPGDVNSALNPLNAVAAM 484
            ||    ::..|...:|:.:          .....:..|.||.::   |.|:....|:.|.|.:..
 Frog   441 KSFLNRSMCSDHQKQDQCSPVLCFPLKPNEDTHQEPRNYVTSTSTQTPSGNEPLKLHSLYANSTT 505

  Fly   485 AAGAVPGPGGYSAKVASEWMQSLSMFGYG--LPGVFTGALYRPPAPFPVSSNYRGFAPRPRGRGR 547
            ..|           |..| |.:|..:...  :||             .|.|.:            
 Frog   506 KNG-----------VCCE-MSALQEYKQASVIPG-------------HVMSLH------------ 533

  Fly   548 GRGIGIRGSRSGYDTYYNTKHDRYDDENENGYYHRSSRGRNRSRSSSSYSRSRSRSRGRRIVCRS 612
                .|.|:.:.::|..|.::....:..    .|::...:......:.....::..:.|:...:.
 Frog   534 ----SILGNSAQHNTSVNVQNCSLKESE----VHKNGTEQEEKEQQTFEIHCQTEDKARKHKSKH 590

  Fly   613 RRSKSRSRSHYRKSSYSSRSRRSHSRSSRSRSKTPSQRKNRKLASTRRSRSSSYSRSRSRSHSRR 677
            :|..|......:|...|:::..|..||.|.:|                |.|..:|:     |..:
 Frog   591 KRDVSSDVDGRKKVKKSNKTHFSGDRSPRQQS----------------SGSPKFSK-----HKSK 634

  Fly   678 QSSSRRDHRGRHRSSRSNSRSR 699
            ....|.||:.:....||.||.|
 Frog   635 HLKDRHDHKRKRHRRRSYSRER 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Xe7NP_730984.1 RRM_AKAP17A 142..268 CDD:240710 63/126 (50%)
GBP_C <275..387 CDD:303769 43/112 (38%)
coiled coil 356..367 CDD:293879 6/10 (60%)
coiled coil 376..387 CDD:293879 1/10 (10%)
akap17aNP_001128287.2 RRM_AKAP17A 143..265 CDD:240710 63/126 (50%)
PTZ00121 <229..>438 CDD:173412 79/222 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 346 1.000 Domainoid score I1040
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 347 1.000 Inparanoid score I2260
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004994
OrthoInspector 1 1.000 - - oto105476
Panther 1 1.100 - - LDO PTHR12484
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4206
SonicParanoid 1 1.000 - - X4065
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.090

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