DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr33 and wdr33

DIOPT Version :10

Sequence 1:NP_730982.1 Gene:Wdr33 / 40698 FlyBaseID:FBgn0046222 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001362197.1 Gene:wdr33 / 548794 XenbaseID:XB-GENE-6083684 Length:1598 Species:Xenopus tropicalis


Alignment Length:647 Identity:353/647 - (54%)
Similarity:441/647 - (68%) Gaps:77/647 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LATNFTSLPPPNMGGQHYRHYHPHHGSNKHGYNQFKPFMPGGFQRPFGMSQDDFDGKRLRKSVMR 81
            :||...| ||.......::|..|.....|      :|    .:.:...|.|..|||||:||:|.|
 Frog     1 MATEIGS-PPRFFHMPRFQHQAPRQLFYK------RP----DYAQQQAMQQLTFDGKRMRKAVNR 54

  Fly    82 KTVDYNASIIKALENRLYQRDYRDRLALQPDSIYVPHMLPPSAYLDNPSNAVTTRFVKTATNKMR 146
            ||:|||.|:||.||||::|||.||..|:|||:.|...::||...::||.|||||:||:|:|||::
 Frog    55 KTIDYNPSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMINNPLNAVTTKFVRTSTNKVK 119

  Fly   147 CPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGY 211
            ||:|.:.|||||||||||||||||||||||||||||||||||..||.|.|||||.||:|.||.||
 Frog   120 CPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHSGY 184

  Fly   212 VKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKC 276
            |||||||||||||:||||||||..||||||:||.:.|||||:|||||:||.|||:||||||||||
 Frog   185 VKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKC 249

  Fly   277 VHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKL 341
            |.|||.||::||||||:|||||.||||:|.:||||||||:|||::|||.|||||:|||||||.||
 Frog   250 VDWHPTKGLLVSGSKDSQQPIKFWDPKNGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKL 314

  Fly   342 FDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVW 406
            |||||||||:||||||||||::|:|||:|||||.|||||||:|||:||.:||:|.:|.||:.::|
 Frog   315 FDIRNLREELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEIAHEGMIW 379

  Fly   407 TLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDECEYDD------AIIP 465
            :||||||||||||||||||.||||||||||.|||:||||.||.  .:.|..||||      |:||
 Frog   380 SLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPG--MSEDGVEYDDIEPNNLAVIP 442

  Fly   466 GMGPEDRVEFT---ESLTADKG-----FIPGLDLDPSKAINDRDR---EKKVPYSKPIPRNFQVN 519
            |||..::::..   |.::.::.     .|||||....:.:....:   :|||||:||||..||..
 Frog   443 GMGIPEQLKMAMEQEQMSKEESSSVEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQA 507

  Fly   520 W------------AGPRRADD-------PSVLSIHEELAAREAKDTTN-----GLNHQQISENTM 560
            |            |.|.|.::       .:...|.:|:||.:   .||     .|..::|::...
 Frog   508 WMQNKVPLMPPSEAIPDRKEENKSDEKKKNQAEIEQEMAALQ---YTNPQLLEQLKIERIAQKQA 569

  Fly   561 EGILASGMLNGLDPQTIVG--------------VLVYNRFIRVHPDSRLMAAIRQG--AEFL 606
            |   |.|.|.|| |..:.|              :....||.:.||..::....:.|  .:||
 Frog   570 E---APGQLQGL-PSPLGGPPHGPSTFQAPGPQLQPTQRFQQPHPTQQMQINAQHGPAGQFL 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr33NP_730982.1 WD40 146..429 CDD:238121 223/282 (79%)
WD40 repeat 149..186 CDD:293791 32/36 (89%)
WD40 repeat 192..227 CDD:293791 27/34 (79%)
WD40 repeat 232..268 CDD:293791 25/35 (71%)
WD40 repeat 275..312 CDD:293791 27/36 (75%)
WD40 repeat 318..355 CDD:293791 30/36 (83%)
WD40 repeat 362..398 CDD:293791 24/35 (69%)
WD40 repeat 405..429 CDD:293791 20/23 (87%)
wdr33NP_001362197.1 WD40 121..402 CDD:238121 222/280 (79%)
WD40 repeat 122..159 CDD:293791 32/36 (89%)
WD40 repeat 165..200 CDD:293791 27/34 (79%)
WD40 repeat 205..241 CDD:293791 25/35 (71%)
WD40 repeat 248..285 CDD:293791 27/36 (75%)
WD40 repeat 291..328 CDD:293791 30/36 (83%)
WD40 repeat 336..372 CDD:293791 24/35 (69%)
WD40 repeat 378..402 CDD:293791 20/23 (87%)
PAT1 <479..>646 CDD:401645 38/156 (24%)
gly_rich_SclB <612..>821 CDD:468478 3/16 (19%)
gly_rich_SclB <807..>1032 CDD:468478
gly_rich_SclB <928..1189 CDD:468478
PABP-1234 <1152..1285 CDD:130689
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.