DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr33 and Wdr33

DIOPT Version :9

Sequence 1:NP_730982.1 Gene:Wdr33 / 40698 FlyBaseID:FBgn0046222 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001100868.2 Gene:Wdr33 / 307524 RGDID:1309230 Length:1331 Species:Rattus norvegicus


Alignment Length:837 Identity:377/837 - (45%)
Similarity:475/837 - (56%) Gaps:134/837 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LATNFTSLPPPNMGGQHYRHYHPHHGSNKHGYNQFKPFMPGGFQRPFGMSQDDFDGKRLRKSVMR 81
            :||...| ||.......::|..|.....|      :|    .|.:...|.|..|||||:||:|.|
  Rat     1 MATEIGS-PPRFFHMPRFQHQAPRQLFYK------RP----DFAQQQAMQQLTFDGKRMRKAVNR 54

  Fly    82 KTVDYNASIIKALENRLYQRDYRDRLALQPDSIYVPHMLPPSAYLDNPSNAVTTRFVKTATNKMR 146
            ||:|||.|:||.||||::|||.||..|:|||:.|...::||...|:||.|||||:||:|:|||::
  Rat    55 KTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVK 119

  Fly   147 CPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGY 211
            ||:|.:.|||||||||||||||||||||||||||||||||||..||.|.|||||.||:|.|||||
  Rat   120 CPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGY 184

  Fly   212 VKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKC 276
            |||||||||||||:||||||||..||||||:||.:.|||||:|||||:||.|||:||||||||||
  Rat   185 VKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKC 249

  Fly   277 VHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKL 341
            |.|||.||::||||||:|||||.||||:|.:||||||||:|||::|.|.|||||:|||||||.||
  Rat   250 VDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 314

  Fly   342 FDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVW 406
            ||||||:||:||||||||||::|:|||:|||||.|||||||:|||:||.:||:|.:|.||:.::|
  Rat   315 FDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 379

  Fly   407 TLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDECEYDD------AIIP 465
            :||||||||||||||||||.||||||||||.|||:||||.||.  .:.|..||||      |:||
  Rat   380 SLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPG--MSEDGVEYDDLEPNSLAVIP 442

  Fly   466 GMGPEDRVEFT---ESLTADKG-----FIPGLDLDPSKAINDRDR---EKKVPYSKPIPRNFQVN 519
            |||..::::..   |.:..|:.     .|||||....:.:....:   :|||||:||||..||..
  Rat   443 GMGIPEQLKLAMEQEQMGKDESNDIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQA 507

  Fly   520 WAG---PRRADDPSVLSIHEELAAREAKDT---------TNGLNHQQISENTMEGILASGMLNGL 572
            |..   |..|.:..:....|::...|.|.|         |....:.|:.|......||....:.:
  Rat   508 WMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEIEQEMATLQYTNPQLLEQLKIERLAQKQADQI 572

  Fly   573 DPQTIVGV---------------LVYNRFIRVHPDSRLMAAIRQGAEFLNKYIDAGKLEELNDVV 622
            .|....|.               .:...|.:.||..::....:.|                    
  Rat   573 QPPPSSGTPLLGPQPFSGQGPMSQIPQGFQQPHPSQQMPLVAQMG-------------------- 617

  Fly   623 PVRDRSRSVSPTVEARGEMVSPPTKKSRFEPRQHNAQLVCVRELMQCKKPFLQSLVAAKAQQPNT 687
            |...:.:..:|..:.:.....||..:....|                     |..:..:..|...
  Rat   618 PPGPQGQFRAPGPQGQMGPQGPPLHQGGGGP---------------------QGFMGPQGPQGPP 661

  Fly   688 EFVDEPPLEQRDRDREREGDRDRERERARERERDQSG-----GRPNPWASNAPWSN---NGNPGG 744
            :.:..|              :|....:..:|.....|     |.|.|..|:.|..:   .|.||.
  Rat   662 QGLPRP--------------QDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGP 712

  Fly   745 NGN-------------GSNGFSNNGAESFNDRDRGGGGQRRRRGINNSGPGNGGGSG 788
            .|:             |..|.............||..|.....|| ..||.:.|..|
  Rat   713 QGHIGPQGPPAPQGHMGPQGPPGTQGMQGPPGPRGMQGPPHPHGI-QGGPTSQGIQG 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr33NP_730982.1 WD40 146..429 CDD:238121 222/282 (79%)
WD40 148..>432 CDD:225201 224/283 (79%)
WD40 repeat 149..186 CDD:293791 32/36 (89%)
WD40 repeat 192..227 CDD:293791 28/34 (82%)
WD40 repeat 232..268 CDD:293791 25/35 (71%)
WD40 repeat 275..312 CDD:293791 27/36 (75%)
WD40 repeat 318..355 CDD:293791 28/36 (78%)
WD40 repeat 362..398 CDD:293791 24/35 (69%)
WD40 repeat 405..429 CDD:293791 20/23 (87%)
Wdr33NP_001100868.2 WD40 121..>405 CDD:225201 221/283 (78%)
WD40 121..402 CDD:238121 218/280 (78%)
WD40 repeat 122..159 CDD:293791 28/36 (78%)
WD40 repeat 165..200 CDD:293791 27/34 (79%)
WD40 repeat 205..241 CDD:293791 27/35 (77%)
WD40 repeat 248..285 CDD:293791 29/36 (81%)
WD40 repeat 291..328 CDD:293791 28/36 (78%)
WD40 repeat 336..371 CDD:293791 28/34 (82%)
WD40 repeat 378..402 CDD:293791 14/23 (61%)
Med15 565..>972 CDD:255446 35/229 (15%)
Collagen 717..769 CDD:189968 14/67 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336563
Domainoid 1 1.000 176 1.000 Domainoid score I3537
eggNOG 1 0.900 - - E2759_KOG0284
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 712 1.000 Inparanoid score I614
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D188586at33208
OrthoFinder 1 1.000 - - FOG0004678
OrthoInspector 1 1.000 - - oto97663
orthoMCL 1 0.900 - - OOG6_102397
Panther 1 1.100 - - LDO PTHR22836
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3285
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

Return to query results.
Submit another query.