DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr33 and pfs-2

DIOPT Version :9

Sequence 1:NP_730982.1 Gene:Wdr33 / 40698 FlyBaseID:FBgn0046222 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001380152.1 Gene:pfs-2 / 175092 WormBaseID:WBGene00011051 Length:809 Species:Caenorhabditis elegans


Alignment Length:853 Identity:304/853 - (35%)
Similarity:426/853 - (49%) Gaps:168/853 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 HYHPHHGSNKHGYNQFKPFMPGGFQRPFGMS--QDDFDGKRLRKSV--MRKTVDYNASIIKALEN 96
            |:|||:                .|||...|.  ..|..|:||||:|  :|:.|||.::::...||
 Worm    36 HHHPHN----------------RFQREHVMPDVMGDGPGRRLRKNVANVRRHVDYVSTVLNHCEN 84

  Fly    97 RLYQRDYRDRLALQPDSIYVPHMLPPSAYLDNPSNAVTTRFVKTATNKMRCPIFTLAWTPEGRRL 161
            ||:|.. :.|:..|||.:|..:.:|..:..|.|.:.:.|:|::||.||::||::::.|:|||:||
 Worm    85 RLWQYG-KQRILQQPDILYQQYAVPADSTPDVPVDCILTKFIRTAMNKVKCPVYSVCWSPEGKRL 148

  Fly   162 VTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKMYQ 226
            :||..:||||||||..|||||||||||.::|.:.|:.|:.|:::.|.||||||||.||||..|:.
 Worm   149 ITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQGGYVKYWQPNMNNAHMFS 213

  Fly   227 AHK-EAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGS 290
            ||| |||||::|:|||.||.:.|||||.|:|||.|..||||||||||:|:|:.|||.||:|.:||
 Worm   214 AHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGS 278

  Fly   291 KDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFR 355
            :|.|||:||||||||..||||..|||:||.:::|.|||||:|..||||:|::||| :.:|::.:|
 Worm   279 RDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIR-MMKEMRTYR 342

  Fly   356 GHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSG 420
            .||||..|::|||||||||.|||.||||::|.|..:||||.:|.|||..:|::.||||||||.:|
 Worm   343 AHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATG 407

  Fly   421 SNDHTIKFWTRNRPGDLMRDKYNL-NTLPASLAALDECEYDDAIIPGMGPEDRVEFTESLTADKG 484
            |||:..|||.||||||.:.|.:.| ||  ..:..||: |.:..:.|   |:..:|..|:...|. 
 Worm   408 SNDNNTKFWARNRPGDTVEDIFGLSNT--NMIGHLDK-EREPRMAP---PKPSIETQETYRPDT- 465

  Fly   485 FIPGLDLDPS--KAIN----------------DRDREK------------KVPYSKPIPRNFQVN 519
            ||||:.||..  :.:|                |..|:.            |.|.:|...|.|:..
 Worm   466 FIPGMGLDEHLYEQLNRDHNMMTTDSTLLVPDDLTRQNFAPMIGAKRTLIKQPPAKKAQRQFERM 530

  Fly   520 WAGPRRADDPSVLSIHEELAAREAKDTTNGLNHQQISENTMEGILASGMLNGLDPQTIVGVLVYN 584
            |                        :.:.|:........||:|        ||..:...|.    
 Worm   531 W------------------------NNSKGIGAGSDDFTTMKG--------GLGREDAEGA---- 559

  Fly   585 RFIRVHPDSRLMAAIRQGAEFLNKYIDAGKLEELNDVVPVRDRS------RSVSPTVEARGEMVS 643
               :..|....:.....|...|..  ...:.:|...|.|.:.:.      |...|.:...|:...
 Worm   560 ---QFGPSKSFLGPPTTGGSLLGP--SQPRPQEFRSVPPPQQQQGPPPNWRHQGPPMSGPGQGYG 619

  Fly   644 PPTKKSRFEPRQHNAQLVCVRELMQCKKP-------------------FLQSLVAAKAQQPNTEF 689
            ||   .|....|...|          :.|                   .||...|::...|..:.
 Worm   620 PP---GRMGGNQGGWQ----------RPPPQGSYGGQGPPQGSYGGQGTLQGSYASQQGPPPRQI 671

  Fly   690 VDEP-PLEQRDRDREREGDRDRERERARERERDQSGGRPNPWASNAPWSN--------------- 738
            ...| .::.|.......|.......|.....:..| |.|..|....|.|:               
 Worm   672 QHIPSDIDYRTAPSSSNGSTGDVDMRTMVPNQPPS-GEPEHWRGPPPVSHQQQSQQQHPPPINMQ 735

  Fly   739 ----NGNPGGNGNGSNGFSNNG---AESFNDRDRGGGGQ---RRRRGINNSGPGNGGGSGGGGGG 793
                ..:|......|:..|.:|   .:..:...:||..|   :...| .|...||..|:.|||.|
 Worm   736 RMDPRRDPRMLSGRSDQLSPSGPPPQQQQSSAQQGGKNQWMPQFEAG-QNQNQGNYAGNRGGGVG 799

  Fly   794 GSGRNRGR 801
            |.||.||:
 Worm   800 GRGRGRGQ 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr33NP_730982.1 WD40 146..429 CDD:238121 174/283 (61%)
WD40 148..>432 CDD:225201 175/284 (62%)
WD40 repeat 149..186 CDD:293791 23/36 (64%)
WD40 repeat 192..227 CDD:293791 18/34 (53%)
WD40 repeat 232..268 CDD:293791 23/35 (66%)
WD40 repeat 275..312 CDD:293791 24/36 (67%)
WD40 repeat 318..355 CDD:293791 18/36 (50%)
WD40 repeat 362..398 CDD:293791 23/35 (66%)
WD40 repeat 405..429 CDD:293791 14/23 (61%)
pfs-2NP_001380152.1 WD40 135..417 CDD:238121 174/282 (62%)
WD40 repeat 136..173 CDD:293791 23/36 (64%)
WD40 repeat 179..215 CDD:293791 18/35 (51%)
WD40 repeat 220..256 CDD:293791 23/35 (66%)
WD40 repeat 263..300 CDD:293791 24/36 (67%)
WD40 repeat 306..342 CDD:293791 18/36 (50%)
WD40 repeat 348..385 CDD:293791 23/36 (64%)
WD40 repeat 392..416 CDD:293791 14/23 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157372
Domainoid 1 1.000 119 1.000 Domainoid score I3609
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 527 1.000 Inparanoid score I668
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D188586at33208
OrthoFinder 1 1.000 - - FOG0004678
OrthoInspector 1 1.000 - - oto17349
orthoMCL 1 0.900 - - OOG6_102397
Panther 1 1.100 - - LDO PTHR22836
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3285
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.900

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