Protein Alignment MED27 and R09F10.3

DIOPT Version :10

• Sequence 1: NP_649569.1
• Gene: MED27 / 40696
• FlyBaseID: FBgn0037359
• Length: 293
• Species: Drosophila melanogaster
• Sequence 2: NP_509401.2
• Gene: R09F10.3 / 181085
• WormBaseID: WBGene00019987
• Length: 468
• Species: Caenorhabditis elegans
• Alignment Length: 355
• Identity: 77/355 - (21%)
• Similarity: 134/355 - (37%)
• Gaps: 91/355 - (25%)

  Fly     3 KLNSTLTAVKNLRSNVRLCFEHLAD---GTDGESGEESRNKFVN--DFQERFAAINSQIREVEQL 62
            :.|:.|..::.||:..    :|:|.   .|.|....|..:.|.|  ||......:.....:::.:
 Worm   139 RCNNCLFLIRKLRNKQ----DHIARLFLDTSGNDQAEFNSAFQNYKDFGLMVHEVMMFYDKLDHI 199

  Fly    63 INGLP--VPPTP-YSLGNTAYLAQET--SQDRQALYPQLVNSYKWMDKVHDHSFLAFNNLNQNTL 122
            ...||  :||.. .:|..|.|..:.|  ..:...|..::::...|    ::.:|..|..|:: .|
 Worm   200 ARHLPKALPPIDNINLMRTLYTQEHTMCHININNLLEKMIDCGNW----NEGNFQTFFYLSE-LL 259

  Fly   123 R--RSYNYCSQKRQRL-PFSSFNNDP-------DH-IDKLLSEINTPPHTSYRIFRP-------- 168
            |  .:..|.:...||| |.:.|::..       :| .:.|..||   .:.|..|:..
 Worm   260 RCGSTRKYSNLPEQRLVPPAMFHSQATNSHAAFEHAFNGLRKEI---ANKSLGIYPKVLQRTTCS 321

  Fly   169 ------FG----------TNAVTIVTISNVMKAAIVFKGVLIEWVTVKGFDEPLEHDDLW----- 212
                  ||          |:...:.||    |..|:.:...||::.:..   |.|.   |
 Worm   322 LIIEFLFGCGGAKPGEKNTDKEIVYTI----KFLIIERNGSIEYINIMA---PTED---WHMVND 376

  Fly   213 ---------AESRYEVFRKVQDHAHSAMLHFFSPTLPDL----AVKSYITWLNSHVKLFLEPCKR 264
                     |.|||||:|::...|:   :|.|:....:.    .:..:|:......:||...|:.
 Worm   377 YAIPTINPFAPSRYEVYRRLTKQAN---IHLFNCFAQNRWTAGTLFHFISLYGKFRELFTTKCRS 438

  Fly   265 CGKFV--VNGLPPTWRDLRT-LEPFHEDCR 291
            |.:.:  .|.|||...|:|. ....||.||
 Worm   439 CKQVLSRKNFLPPLIFDIRNPNNAAHEVCR 468

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED27	NP_649569.1	Med27	209..290	CDD:463298	24/101 (24%)
R09F10.3	NP_509401.2	rad23	<15..>85	CDD:273167
		Med27	382..467	CDD:463298	23/87 (26%)