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Protein Alignment elm and SOS3
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001190377.1 |
Gene: | SOS3 / 832494 |
AraportID: | AT5G24270 |
Length: | 222 |
Species: | Arabidopsis thaliana |
Alignment Length: | 165 |
Identity: | 48/165 - (29%) |
Similarity: | 79/165 - (47%) |
Gaps: | 31/165 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 TGFTPNQIERLYSRFTSLDRN--DCGTLSREDLMRIPELAI-------NPLCERIVHSFFAESND 76
|.||..::|.||..|..|..: |.|.:.:|:. :||: |...:||...|..:.|
plant 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEF----QLALFRNRNRRNLFADRIFDVFDVKRN- 88
Fly 77 DRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDEL----LSILH--M 135
..:.|.:|:..|..|.|.. ...||:|||||:|||...|.|.|:|| :::|| .
plant 89 GVIEFGEFVRSLGVFHPSA--------PVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESE 145
Fly 136 MVGANISQDQLVSIAERTILEADLCCQGKISFEDF 170
:| :|:|.:..:.::..::||....|||..:::
plant 146 LV---LSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
47/163 (29%) |
SOS3 | NP_001190377.1 |
FRQ1 |
29..187 |
CDD:227455 |
48/165 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0034 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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