DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment elm and CBL10

DIOPT Version :10

Sequence 1:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_195026.1 Gene:CBL10 / 829437 AraportID:AT4G33000 Length:256 Species:Arabidopsis thaliana


Alignment Length:172 Identity:48/172 - (27%)
Similarity:86/172 - (50%) Gaps:23/172 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RNEEIAQIQEETGFTPNQIERLYSRFTSLDRN--DCGTLSREDLMRIPELAI--NPLCERI---- 66
            ::.::.::..|:.|:.|::|.||..|..|..:  |.|.:.:|:|    .||:  .|..|.:    
plant    60 QHADLERLARESQFSVNEVEALYELFKKLSCSIIDDGLIHKEEL----RLALFQAPYGENLFLDR 120

  Fly    67 VHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDE--- 128
            |...|.|..:..:.|.:|::.|:.|.|..        |.:||..|||::|||...|.|.|:|   
plant   121 VFDLFDEKKNGVIEFEEFIHALSVFHPYA--------SIQEKTDFAFRLYDLRQTGFIEREEVQQ 177

  Fly   129 LLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDF 170
            ::|.:.:.....:|.:.|..|.::|..:||....||||.:::
plant   178 MVSAILLESDMMLSDELLTMIIDKTFADADSDKDGKISKDEW 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_649568.1 FRQ1 27..174 CDD:444056 45/155 (29%)
CBL10NP_195026.1 FRQ1 95..226 CDD:444056 39/137 (28%)

Return to query results.
Submit another query.