DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment elm and CBL6

DIOPT Version :10

Sequence 1:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_567492.1 Gene:CBL6 / 827330 AraportID:AT4G16350 Length:226 Species:Arabidopsis thaliana


Alignment Length:178 Identity:56/178 - (31%)
Similarity:84/178 - (47%) Gaps:24/178 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TGFTPNQIERLYSRFTSLDRNDCGTLSRE--DLMRIPELAINPLCERIVHSFFAESNDDRVNFRQ 83
            |.||.|:||.||..|.|:.:|  |.:.:|  .|:.........|....|...|...|...::|..
plant    38 TVFTVNEIEALYELFKSISKN--GLIDKEQFQLVLFKMNTTRSLFADRVFDLFDTKNTGILDFEA 100

  Fly    84 FMNVLAHFRPLRDNKQSKLNSR-EEKLKFAFKMYDLDDDGVISRDELLSILHMMV------GANI 141
            |...|:.|.|         |:: |:|::|:||:|||:..|.|.|.|   :..|:|      |.|:
plant   101 FARSLSVFHP---------NAKFEDKIEFSFKLYDLNQQGYIKRQE---VKQMVVRTLAESGMNL 153

  Fly   142 SQDQLVSIAERTILEADLCCQGKISFEDF-CKALDRTDVDQKMSIRFL 188
            |...:.||.::|..|||....|||..|:: ...|....:.|.||::.|
plant   154 SDHVIESIIDKTFEEADTKLDGKIDKEEWRSLVLRHPSLLQNMSLQHL 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_649568.1 FRQ1 27..174 CDD:444056 47/156 (30%)
CBL6NP_567492.1 PTZ00183 44..190 CDD:185503 48/159 (30%)

Return to query results.
Submit another query.