powered by:
Protein Alignment elm and AT3G03400
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_186990.1 |
Gene: | AT3G03400 / 821266 |
AraportID: | AT3G03400 |
Length: | 137 |
Species: | Arabidopsis thaliana |
Alignment Length: | 163 |
Identity: | 44/163 - (26%) |
Similarity: | 73/163 - (44%) |
Gaps: | 41/163 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 LYSRF-TSLDRNDCGTLSREDLMRIPELAINPL--CERIVHSFFA--ESNDDRVNFRQFMNVLAH 90
::.|| ||.| |.:|.|: .|....|::|. .|::|..|.. .:.|.:|:..:|.:.
plant 9 IFERFDTSKD----GKISWEE-FRDAIHALSPSIPSEKLVEMFIQLDTNGDGQVDAAKFASC--- 65
Fly 91 FRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANISQDQLVSIAERTIL 155
:....||.....|::||.|||:||::.||.||.:| ||:: :..:.|:..:
plant 66 ---MDQTAQSSGGDVEKELKDAFKLYDINCDGKISANE----LHVV---------MTRLGEKCTV 114
Fly 156 EADLCCQGKISFEDFCKALDRTDVDQKMSIRFL 188
|: |.|.: ...|||....|||:
plant 115 ES---CVGMV---------QAIDVDGDGYIRFV 135
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
38/146 (26%) |
AT3G03400 | NP_186990.1 |
PTZ00184 |
10..134 |
CDD:185504 |
42/159 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
Return to query results.
Submit another query.