DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and Cib1

DIOPT Version :10

Sequence 1:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_038948271.1 Gene:Cib1 / 81823 RGDID:620133 Length:203 Species:Rattus norvegicus


Alignment Length:189 Identity:49/189 - (25%)
Similarity:90/189 - (47%) Gaps:21/189 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGT--------LSREDLMRIPEL 57
            ||...|. |..|.:|:.|:.|..|..:|...:.||..|...:..|        :|.|.::.:|||
  Rat     1 MGGSGSR-LSKELLAEYQDLTFLTKQEILLAHRRFCELLPPEHRTVEESLHTRVSFEQILSLPEL 64

  Fly    58 AINPLCERIVHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDG 122
            ..||..|||...|......|.::|..|:::|:.|        |...:.:.|..:||:::|.||||
  Rat    65 KANPFKERICMVFSTSPTRDSLSFEDFLDLLSVF--------SDTATPDIKSHYAFRIFDFDDDG 121

  Fly   123 VISRDELLSILHMMVG----ANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRT 177
            .:.|::|..:::.:.|    ..:|..::..:.:..:.|:|:...|.|:..:|...:.|:
  Rat   122 TLDREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_649568.1 FRQ1 27..174 CDD:444056 39/158 (25%)
Cib1XP_038948271.1 EFh 111..178 CDD:238008 16/66 (24%)

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