DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and Kcnip2

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_006527533.1 Gene:Kcnip2 / 80906 MGIID:2135916 Length:286 Species:Mus musculus


Alignment Length:200 Identity:48/200 - (24%)
Similarity:93/200 - (46%) Gaps:52/200 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDC--GTLSREDLMRIPELAINPLCERIV 67
            |::..|.|.:.|:||:|.||..:::.||..|    :|:|  |.::.|:.            ::|.
Mouse   100 STVCHRPEGLEQLQEQTKFTRRELQVLYRGF----KNECPSGIVNEENF------------KQIY 148

  Fly    68 HSFFAE----------------SNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMY 116
            ..||.:                ::|..|:|..|:..|:..  ||       .:.:::|.:||.:|
Mouse   149 SQFFPQGDSSNYATFLFNAFDTNHDGSVSFEDFVAGLSVI--LR-------GTIDDRLNWAFNLY 204

  Fly   117 DLDDDGVISRDELLSI---LHMMVGANISQDQLVSIAERTILEA-----DLCCQGKISFEDFCKA 173
            ||:.||.|:::|:|.|   ::.|:| ..:...|...|.|..:|:     |....|.::.|:|.::
Mouse   205 DLNKDGCITKEEMLDIMKSIYDMMG-KYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIES 268

  Fly   174 LDRTD 178
            ..:.:
Mouse   269 CQQDE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 41/175 (23%)
Kcnip2XP_006527533.1 FRQ1 109..275 CDD:227455 45/190 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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